RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ITGB8P26012 769 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 ADCYAP1R1P41586 468 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 CDK8P49336 464 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 SMAD3P84022 425 aaKnown RBP14.69□□□□□ -0.06
LIMS2-210ENST00000413578 PLS1Q14651 629 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 ZNF792Q3KQV3 632 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 C16orf86Q6ZW13 317 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 RIOX2Q8IUF8 465 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 REPS2Q8NFH8 660 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 CDX2Q99626 313 aaPredicted RBP14.69□□□□□ -0.06
LIMS2-210ENST00000413578 TTYH1Q9H313 450 aaPredicted RBP14.69□□□□□ -0.06
LIMS2-210ENST00000413578 SH2D4AQ9H788 454 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 CYP2D7A0A087X1C5 515 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 MBD4O95243 580 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 CHGBP05060 677 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 RPAP2Q8IXW5 612 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-210ENST00000413578 FERMT2Q96AC1 680 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 SEMA6BQ9H3T3 888 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 PRDM5Q9NQX1 630 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-210ENST00000413578 FBXO28Q9NVF7 368 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
LIMS2-210ENST00000413578 ZNF214Q9UL59 606 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-210ENST00000413578 DIS3Q9Y2L1 958 aaKnown RBP14.68□□□□□ -0.06
LIMS2-210ENST00000413578 USP17L12C9JPN9 530 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 USP17L21D6R901 530 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 VWA5AO00534 786 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
LIMS2-210ENST00000413578 EEF2P13639 858 aaKnown RBP14.67□□□□□ -0.06
LIMS2-210ENST00000413578 TAL1P17542 331 aaPredicted RBP14.67□□□□□ -0.06
LIMS2-210ENST00000413578 ATP5JP18859 108 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 HNRNPUQ00839 825 aaKnown RBP eCLIP14.67□□□□□ -0.06
LIMS2-210ENST00000413578 TLE2Q04725 743 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 TINF2Q9BSI4 451 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.67□□□□□ -0.06
LIMS2-210ENST00000413578 XPNPEP3Q9NQH7 507 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 PPP1R9AQ9ULJ8 1098 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 EYSQ5T1H1 3165 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 TTC28Q96AY4 2481 aa14.67□□□□□ -0.06
LIMS2-210ENST00000413578 KIAA0355O15063 1070 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 RAB11FIP3O75154 756 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 ADAMTS4O75173 837 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 PGK2P07205 417 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 ZNF865P0CJ78 1059 aaPredicted RBP14.66□□□□□ -0.06
LIMS2-210ENST00000413578 RARBP10826 455 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 EPHB4P54760 987 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 UBE3CQ15386 1083 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 MMP19Q99542 508 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 HAUS7Q99871 368 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 BOLA2Q9H3K6 86 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 ZBTB40Q9NUA8 1239 aa14.66□□□□□ -0.06
LIMS2-210ENST00000413578 PARP14Q460N5 1801 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-210ENST00000413578 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 PGK1P00558 417 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-210ENST00000413578 STAT3P40763 770 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 KCTD2Q14681 263 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 CTR9Q6PD62 1173 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 TACC3Q9Y6A5 838 aa14.65□□□□□ -0.06
LIMS2-210ENST00000413578 TMEM265A0A087WTH1 108 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 APBB1O00213 710 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 HMMRO75330 724 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 CLTBP09497 229 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 AKR1A1P14550 325 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 COPB2P35606 906 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 FAM83BQ5T0W9 1011 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 CCSAPQ6IQ19 270 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-210ENST00000413578 ANKRD33Q7Z3H0 272 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 RNF180Q86T96 592 aa14.64□□□□□ -0.07
LIMS2-210ENST00000413578 MAFAQ8NHW3 353 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-210ENST00000413578 LENG1Q96BZ8 264 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-210ENST00000413578 PUS7LQ9H0K6 701 aaKnown RBP14.64□□□□□ -0.07
LIMS2-210ENST00000413578 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-210ENST00000413578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIMS2-210ENST00000413578 MSL3Q8N5Y2 521 aaKnown RBP14.63□□□□□ -0.07
LIMS2-210ENST00000413578 KLHDC9Q8NEP7 349 aa14.63□□□□□ -0.07
LIMS2-210ENST00000413578 MYLIPQ8WY64 445 aa14.63□□□□□ -0.07
LIMS2-210ENST00000413578 TOX2Q96NM4 488 aa14.63□□□□□ -0.07
LIMS2-210ENST00000413578 TSEN34Q9BSV6 310 aaKnown RBP14.63□□□□□ -0.07
LIMS2-210ENST00000413578 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIMS2-210ENST00000413578 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
LIMS2-210ENST00000413578 DNAJC25-GNG10A0A024R161 153 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 ATP2A1O14983 1001 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 SNAI1O95863 264 aaPredicted RBP14.62□□□□□ -0.07
LIMS2-210ENST00000413578 FAAP100Q0VG06 881 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 MAMDC4Q6UXC1 1216 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 PRUNE2Q8WUY3 3088 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 RNPC3Q96LT9 517 aaKnown RBP14.62□□□□□ -0.07
LIMS2-210ENST00000413578 TEX13BQ9BXU2 312 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 ARPP21Q9UBL0 812 aaPredicted RBP14.62□□□□□ -0.07
LIMS2-210ENST00000413578 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 SLC4A4Q9Y6R1 1079 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 SYNGAP1Q96PV0 1343 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 SYNRGQ9UMZ2 1314 aa14.62□□□□□ -0.07
LIMS2-210ENST00000413578 GREB1LQ9C091 1923 aaPredicted RBP14.61□□□□□ -0.07
LIMS2-210ENST00000413578 IGKV6D-41A0A0C4DH26 115 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 PQBP1O60828 265 aaKnown RBP14.61□□□□□ -0.07
LIMS2-210ENST00000413578 RASA1P20936 1047 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 CST5P28325 142 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms