RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 GOLGA1Q92805 767 aa16.94■□□□□ 0.3
TTC39A-208ENST00000413473 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
TTC39A-208ENST00000413473 LIMA1Q9UHB6 759 aaKnown RBP16.94■□□□□ 0.3
TTC39A-208ENST00000413473 SASH3O75995 380 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 TBC1D8O95759 1140 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 RCSD1Q6JBY9 416 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 RWDD2AQ9UIY3 292 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 MAPK8IP1Q9UQF2 711 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 JAG2Q9Y219 1238 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 ITIH6Q6UXX5 1313 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 RNF225M0QZC1 329 aaPredicted RBP16.93■□□□□ 0.3
TTC39A-208ENST00000413473 ATP8B1O43520 1251 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 HIBADHP31937 336 aaKnown RBP16.93■□□□□ 0.3
TTC39A-208ENST00000413473 KCNQ4P56696 695 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 RPS8P62241 208 aaKnown RBP16.93■□□□□ 0.3
TTC39A-208ENST00000413473 PAK1Q13153 545 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 CCDC51Q96ER9 411 aa16.93■□□□□ 0.3
TTC39A-208ENST00000413473 MYH8P13535 1937 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 NELFBQ8WX92 580 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
TTC39A-208ENST00000413473 TAB2Q9NYJ8 693 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 RPN1P04843 607 aaKnown RBP16.92■□□□□ 0.3
TTC39A-208ENST00000413473 COPB1P53618 953 aaKnown RBP16.92■□□□□ 0.3
TTC39A-208ENST00000413473 ZNF658Q5TYW1 1059 aaPredicted RBP16.92■□□□□ 0.3
TTC39A-208ENST00000413473 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 ACRBPQ8NEB7 543 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 GPKOWQ92917 476 aaPredicted RBP eCLIP16.92■□□□□ 0.3
TTC39A-208ENST00000413473 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
TTC39A-208ENST00000413473 RASGRP4Q8TDF6 673 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 ARFGAP3Q9NP61 516 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 ARPP21Q9UBL0 812 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 GDAQ9Y2T3 454 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 A0A1B0GUL6 1792 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 KCNJ18B7U540 433 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 POLR3GO15318 223 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 ABL1P00519 1130 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 KIF5BP33176 963 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 TXLNAP40222 546 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 CHMP4BP1P59074 171 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 ERVK-24P63145 666 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 SPAG1Q07617 926 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 KCNJ12Q14500 433 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 SBK1Q52WX2 424 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 TCP11X2Q5H9J9 407 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 ARL6IP4Q66PJ3 421 aaKnown RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 SRGAP1Q7Z6B7 1085 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 NUP88Q99567 741 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 CDC23Q9UJX2 597 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 COL16A1Q07092 1604 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-208ENST00000413473 RREB1Q92766 1687 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 FAM205AQ6ZU69 1335 aa16.91■□□□□ 0.3
TTC39A-208ENST00000413473 FECHP22830 423 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 CALML3P27482 149 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
TTC39A-208ENST00000413473 PRCPP42785 496 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 TFAP4Q01664 338 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 SLC10A5Q5PT55 438 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 TBC1D9BQ66K14 1250 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 KAT14Q9H8E8 782 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 ABHD10Q9NUJ1 306 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 ERICH4A6NGS2 130 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 FAM193AP78312 1265 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 TTF2Q9UNY4 1162 aaKnown RBP16.9■□□□□ 0.3
TTC39A-208ENST00000413473 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 STAT6P42226 847 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
TTC39A-208ENST00000413473 TXNRD3Q86VQ6 643 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 SLC35F6Q8N357 371 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 UBXN6Q9BZV1 441 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 KRT9P35527 623 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 ZCCHC17Q9NP64 241 aaKnown RBP16.89■□□□□ 0.29
TTC39A-208ENST00000413473 SCN7AQ01118 1682 aa16.89■□□□□ 0.29
TTC39A-208ENST00000413473 CTAGE9A4FU28 777 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 UBXN1Q04323 297 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 FUT8Q9BYC5 575 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 DISC1Q9NRI5 854 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 TRIM49BA6NDI0 452 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 PP2D1A8MPX8 630 aa16.88■□□□□ 0.29
TTC39A-208ENST00000413473 SMC1AQ14683 1233 aaKnown RBP16.88■□□□□ 0.29
TTC39A-208ENST00000413473 DTHD1Q6ZMT9 781 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms