RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 SLKQ9H2G2 1235 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-206ENST00000413380 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
HDAC9-206ENST00000413380 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 ZHX2Q9Y6X8 837 aa13.54□□□□□ -0.24
HDAC9-206ENST00000413380 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-206ENST00000413380 CDC27P30260 824 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 ATP2B2Q01814 1243 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 FUT2Q10981 343 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 SPP2Q13103 211 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 RTN1Q16799 776 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 KIAA1755Q5JYT7 1200 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
HDAC9-206ENST00000413380 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
HDAC9-206ENST00000413380 LLPHQ9BRT6 129 aaKnown RBP13.53□□□□□ -0.24
HDAC9-206ENST00000413380 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
HDAC9-206ENST00000413380 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 TMEM88BA6NKF7 163 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 IRF6O14896 467 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 GJA5P36382 358 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 GNAQP50148 359 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 HUNKP57058 714 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 MTMR2Q13614 643 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 BTNL9Q6UXG8 535 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-206ENST00000413380 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 SLC10A4Q96EP9 437 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 WNK4Q96J92 1243 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.25
HDAC9-206ENST00000413380 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 IFNAR1P17181 557 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 RXRAP19793 462 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 MOGSQ13724 837 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 NECAB1Q8N987 351 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 FEZ1Q99689 392 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
HDAC9-206ENST00000413380 NCOA5Q9HCD5 579 aaKnown RBP13.51□□□□□ -0.25
HDAC9-206ENST00000413380 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-206ENST00000413380 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 BMP3P12645 472 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 VCAM1P19320 739 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
HDAC9-206ENST00000413380 SLC1A4P43007 532 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 CCT2P78371 535 aaKnown RBP13.5□□□□□ -0.25
HDAC9-206ENST00000413380 STK3Q13188 491 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 NSUN7Q8NE18 718 aaKnown RBP13.5□□□□□ -0.25
HDAC9-206ENST00000413380 RIOX1Q9H6W3 641 aa13.5□□□□□ -0.25
HDAC9-206ENST00000413380 MYPNQ86TC9 1320 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-206ENST00000413380 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 CDKL5O76039 1030 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 SLC10A3P09131 477 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 APLP1P51693 650 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 NUBP1P53384 320 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 HMGCS2P54868 508 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 SNAPC2Q13487 334 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 RGMBQ6NW40 437 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 CPLX2Q6PUV4 134 aaKnown RBP13.49□□□□□ -0.25
HDAC9-206ENST00000413380 RAB11FIP4Q86YS3 637 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
HDAC9-206ENST00000413380 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 MTMR8Q96EF0 704 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
HDAC9-206ENST00000413380 RNF26Q9BY78 433 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-206ENST00000413380 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-206ENST00000413380 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-206ENST00000413380 SMCHD1A6NHR9 2005 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 RASSF10A6NK89 507 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-206ENST00000413380 CPLX1O14810 134 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 CYTH3O43739 400 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms