RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 ZNF444Q8N0Y2 327 aaPredicted RBP15.64■□□□□ 0.09
NUB1-201ENST00000413040 SPATA20Q8TB22 786 aa15.64■□□□□ 0.09
NUB1-201ENST00000413040 NOL10Q9BSC4 688 aaKnown RBP15.64■□□□□ 0.09
NUB1-201ENST00000413040 SRRTQ9BXP5 876 aaKnown RBP15.64■□□□□ 0.09
NUB1-201ENST00000413040 ATP8A2Q9NTI2 1148 aa15.64■□□□□ 0.09
NUB1-201ENST00000413040 ADD3Q9UEY8 706 aaKnown RBP15.64■□□□□ 0.09
NUB1-201ENST00000413040 TADA3O75528 432 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 TSPY3P0CV98 308 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 TSPY8P0CW00 308 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 FXR1P51114 621 aaKnown RBP eCLIP15.63■□□□□ 0.09
NUB1-201ENST00000413040 KIF4BQ2VIQ3 1234 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 UTP14CQ5TAP6 766 aaKnown RBP15.63■□□□□ 0.09
NUB1-201ENST00000413040 TPTE2Q6XPS3 522 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 TGFBRAP1Q8WUH2 860 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 NELFBQ8WX92 580 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 ECM29Q5VYK3 1845 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 H2AFXP16104 143 aaPredicted RBP15.63■□□□□ 0.09
NUB1-201ENST00000413040 PFKFB3Q16875 520 aaPredicted RBP15.63■□□□□ 0.09
NUB1-201ENST00000413040 INF2Q27J81 1249 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 ACRBPQ8NEB7 543 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 CTAGE1Q96RT6 745 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 ARPP21Q9UBL0 812 aaPredicted RBP15.63■□□□□ 0.09
NUB1-201ENST00000413040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
NUB1-201ENST00000413040 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
NUB1-201ENST00000413040 KIF5CO60282 957 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 UBA7P41226 1012 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 PAK1Q13153 545 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 KRT31Q15323 416 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 MAPKAPK5Q8IW41 473 aa15.63■□□□□ 0.09
NUB1-201ENST00000413040 DOT1LQ8TEK3 1739 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 TRIM49BA6NDI0 452 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 EFCAB8A8MWE9 144 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
NUB1-201ENST00000413040 IL17AQ16552 155 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 RASGRP2Q7LDG7 609 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 SH3RF1Q7Z6J0 888 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 AMOTL1Q8IY63 956 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 TNFRSF25Q93038 417 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 MTRQ99707 1265 aa15.62■□□□□ 0.09
NUB1-201ENST00000413040 ORC4O43929 436 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 PNMA6AP0CW24 399 aaPredicted RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 RCSD1Q6JBY9 416 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 DTHD1Q6ZMT9 781 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 SH3RF3Q8TEJ3 882 aaPredicted RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 ANKRD2Q9GZV1 360 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 THRAP3Q9Y2W1 955 aaKnown RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 RPN1P04843 607 aaKnown RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 PCP11498 1178 aaKnown RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 CALML3P27482 149 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 KRT9P35527 623 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 UBXN1Q04323 297 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 MFAP3LO75121 409 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 TFRCP02786 760 aaKnown RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 TYW1BQ6NUM6 668 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 APTXQ7Z2E3 356 aaKnown RBP15.61■□□□□ 0.09
NUB1-201ENST00000413040 C8orf37Q96NL8 207 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 SLF1Q9BQI6 1058 aa15.61■□□□□ 0.09
NUB1-201ENST00000413040 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
NUB1-201ENST00000413040 GYPCP04921 128 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 PRCPP42785 496 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 MYH13Q9UKX3 1938 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 KCNJ18B7U540 433 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 COPB1P53618 953 aaKnown RBP15.6■□□□□ 0.09
NUB1-201ENST00000413040 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 GABPB1Q06547 395 aaPredicted RBP15.6■□□□□ 0.09
NUB1-201ENST00000413040 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 GRIK5Q16478 980 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 CNGA4Q8IV77 575 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 PCMTD1Q96MG8 357 aaPredicted RBP15.6■□□□□ 0.09
NUB1-201ENST00000413040 PANX2Q96RD6 677 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 TMEM60Q9H2L4 133 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 LRP5O75197 1615 aa15.6■□□□□ 0.09
NUB1-201ENST00000413040 STRCQ7RTU9 1775 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 SEMA3EO15041 775 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 LETM2Q2VYF4 491 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 CDKAL1Q5VV42 579 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 TRIM47Q96LD4 638 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 IL17RBQ9NRM6 502 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 MRFAP1Q9Y605 127 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 SPATA31A5Q5VU36 1347 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 SPATA31A7Q8IWB4 1347 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 ABL1P00519 1130 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 TERF2Q15554 542 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
NUB1-201ENST00000413040 FHOD1Q9Y613 1164 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 CICQ96RK0 1608 aaPredicted RBP15.59■□□□□ 0.09
NUB1-201ENST00000413040 NFIXQ14938 502 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 E2F4Q16254 413 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 SPTY2D1Q68D10 685 aaPredicted RBP15.59■□□□□ 0.09
NUB1-201ENST00000413040 PDXDC2PQ6P474 469 aa15.59■□□□□ 0.09
NUB1-201ENST00000413040 DOCK2Q92608 1830 aa15.58■□□□□ 0.09
NUB1-201ENST00000413040 RNF225M0QZC1 329 aaPredicted RBP15.58■□□□□ 0.08
NUB1-201ENST00000413040 FGRP09769 529 aa15.58■□□□□ 0.08
NUB1-201ENST00000413040 WWC2Q6AWC2 1192 aa15.58■□□□□ 0.08
NUB1-201ENST00000413040 SLC35F6Q8N357 371 aa15.58■□□□□ 0.08
NUB1-201ENST00000413040 PARD6BQ9BYG5 372 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms