RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 TTC14Q96N46 770 aa15.53■□□□□ 0.08
HDAC8-210ENST00000412342 ZKSCAN3Q9BRR0 538 aa15.53■□□□□ 0.08
HDAC8-210ENST00000412342 RABGAP1Q9Y3P9 1069 aa15.53■□□□□ 0.08
HDAC8-210ENST00000412342 FLOT1O75955 427 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 TOP1P11387 765 aaKnown RBP15.52■□□□□ 0.08
HDAC8-210ENST00000412342 COL9A3Q14050 684 aaPredicted RBP15.52■□□□□ 0.08
HDAC8-210ENST00000412342 PKN2Q16513 984 aaKnown RBP15.52■□□□□ 0.08
HDAC8-210ENST00000412342 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 DGKHQ86XP1 1220 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 MB21D2Q8IYB1 491 aaPredicted RBP15.52■□□□□ 0.08
HDAC8-210ENST00000412342 REPS2Q8NFH8 660 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 HOXC10Q9NYD6 342 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 PTPN22Q9Y2R2 807 aa15.52■□□□□ 0.08
HDAC8-210ENST00000412342 TNKSO95271 1327 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 RAD21O60216 631 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-210ENST00000412342 GNRH1P01148 92 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 FCGRTP55899 365 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 ANTXR2P58335 489 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 KIF22Q14807 665 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 SEC23AQ15436 765 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 FBXO46Q6PJ61 603 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-210ENST00000412342 ENAHQ8N8S7 591 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-210ENST00000412342 GPRC5AQ8NFJ5 357 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 ZSCAN10Q96SZ4 725 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-210ENST00000412342 PAGR1Q9BTK6 254 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 PORCNQ9H237 461 aa15.51■□□□□ 0.07
HDAC8-210ENST00000412342 ZNF236Q9UL36 1845 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 SNHG28P0DPA3 235 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 BMP3P12645 472 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 IQCA1Q86XH1 822 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 NCOA7Q8NI08 942 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 SLF1Q9BQI6 1058 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 SRRDQ9UH36 339 aa15.5■□□□□ 0.07
HDAC8-210ENST00000412342 VWA5AO00534 786 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-210ENST00000412342 PDHBP11177 359 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 MCCP23508 829 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 PRKCZQ05513 592 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 TMEM132BQ14DG7 1078 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 ARHGEF6Q15052 776 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 CCDC178Q5BJE1 867 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 MB21D1Q8N884 522 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 DCAF4Q8WV16 495 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 KCNB2Q92953 911 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 ZNF214Q9UL59 606 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-210ENST00000412342 GABRQQ9UN88 632 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 PTCH2Q9Y6C5 1203 aa15.49■□□□□ 0.07
HDAC8-210ENST00000412342 TNPO2O14787 897 aaKnown RBP15.48■□□□□ 0.07
HDAC8-210ENST00000412342 PLA2G6O60733 806 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 SLC1A4P43007 532 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 PRMT2P55345 433 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 TRDNQ13061 729 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
HDAC8-210ENST00000412342 ABHD8Q96I13 439 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 MOV10L1Q9BXT6 1211 aaKnown RBP15.48■□□□□ 0.07
HDAC8-210ENST00000412342 SPATC1LQ9H0A9 340 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 FEM1BQ9UK73 627 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 GJD2Q9UKL4 321 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 HPS5Q9UPZ3 1129 aa15.48■□□□□ 0.07
HDAC8-210ENST00000412342 TMEM232C9JQI7 657 aa15.47■□□□□ 0.07
HDAC8-210ENST00000412342 HSPA4P34932 840 aa15.47■□□□□ 0.07
HDAC8-210ENST00000412342 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
HDAC8-210ENST00000412342 PNMA1Q8ND90 353 aa15.47■□□□□ 0.07
HDAC8-210ENST00000412342 CHMP4CQ96CF2 233 aa15.47■□□□□ 0.07
HDAC8-210ENST00000412342 UBAC1Q9BSL1 405 aa15.47■□□□□ 0.07
HDAC8-210ENST00000412342 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
HDAC8-210ENST00000412342 ATP2A1O14983 1001 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 EPB41L2O43491 1005 aaKnown RBP15.46■□□□□ 0.07
HDAC8-210ENST00000412342 REC8O95072 547 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 MAPK4P31152 587 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 FLT3LGP49771 235 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 STAT2P52630 851 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 CCNA1P78396 465 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 ZNF543Q08ER8 600 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 ADCK5Q3MIX3 580 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 CHST3Q7LGC8 479 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 GPR142Q7Z601 462 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 SHCBP1Q8NEM2 672 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 IGDCC4Q8TDY8 1250 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 USP6NLQ92738 828 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 SLC38A10Q9HBR0 1119 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 MTMR7Q9Y216 660 aa15.46■□□□□ 0.07
HDAC8-210ENST00000412342 RBBP6Q7Z6E9 1792 aaKnown RBP15.45■□□□□ 0.06
HDAC8-210ENST00000412342 HOXD10P28358 340 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 IRF5Q13568 498 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 MORN1Q5T089 497 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 IFIT1BQ5T764 474 aaKnown RBP15.45■□□□□ 0.06
HDAC8-210ENST00000412342 RNF20Q5VTR2 975 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
HDAC8-210ENST00000412342 FAM160B2Q86V87 743 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 KIFC2Q96AC6 838 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms