RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 GJB4Q9NTQ9 266 aa13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 SEC63Q9UGP8 760 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-202ENST00000412157 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 hCG_1642624A0A1W2PR95 340 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 USP17L5A8MUK1 530 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 GOLGA8HP0CJ92 632 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 EPS15P42566 896 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 ANGEL2Q5VTE6 544 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 GGA3Q9NZ52 723 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 PGAP2Q9UHJ9 254 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
SNRNP35-202ENST00000412157 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 RAD21O60216 631 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 KRT2P35908 639 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 SLFN13Q68D06 897 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 MIGA2Q7L4E1 593 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 CCDC148Q8NFR7 591 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 DEFB129Q9H1M3 183 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 KCNJ14Q9UNX9 436 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 ELP1O95163 1332 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
SNRNP35-202ENST00000412157 KIF28PB7ZC32 967 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 ASNSP08243 561 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 CALML3P27482 149 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 CAP2P40123 477 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 SLC1A4P43007 532 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 NLRP5P59047 1200 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 UBE2HP62256 183 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 MAP3K10Q02779 954 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 RRP1BQ14684 758 aaKnown RBP13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 ZNF713Q8N859 430 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 CCDC12Q8WUD4 166 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 TEPSINQ96N21 525 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 PHF20Q9BVI0 1012 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 SCAF8Q9UPN6 1271 aaKnown RBP13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 PCNTO95613 3336 aa13.38□□□□□ -0.27
SNRNP35-202ENST00000412157 GOLGA6L4A6NEF3 574 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 CYTH3O43739 400 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 LEO1Q8WVC0 666 aaPredicted RBP13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 UBA5Q9GZZ9 404 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
SNRNP35-202ENST00000412157 POTECB2RU33 542 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 F5H6K3 240 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 YEATS4O95619 227 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 JAG1P78504 1218 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 KLRC3Q07444 240 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 STK38Q15208 465 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 NBPF12Q5TAG4 269 aaPredicted RBP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 GPKOWQ92917 476 aaPredicted RBP eCLIP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 SYAP1Q96A49 352 aaPredicted RBP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 GMCL1Q96IK5 515 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 L3MBTL3Q96JM7 780 aaPredicted RBP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 VAT1LQ9HCJ6 419 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 RTEL1Q9NZ71 1219 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
SNRNP35-202ENST00000412157 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 STXBP3O00186 592 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 CTNND1O60716 968 aaKnown RBP13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 GADD45BO75293 160 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms