RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 STAP2Q9UGK3 403 aa13.83□□□□□ -0.2
LINC00963-201ENST00000412141 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
LINC00963-201ENST00000412141 SUPT16HQ9Y5B9 1047 aaKnown RBP13.83□□□□□ -0.2
LINC00963-201ENST00000412141 ADORA2AP29274 412 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
LINC00963-201ENST00000412141 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 GRB14Q14449 540 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 NECAB2Q7Z6G3 386 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 LRRC47Q8N1G4 583 aaKnown RBP13.82□□□□□ -0.2
LINC00963-201ENST00000412141 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 EVI5LQ96CN4 794 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
LINC00963-201ENST00000412141 F5H6K3 240 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 EVI5O60447 810 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 NDUFB10O96000 172 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 TSPY3P0CV98 308 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 TSPY8P0CW00 308 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 TFAP4Q01664 338 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 PDE4BQ07343 736 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 KLRC3Q07444 240 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 PPARAQ07869 468 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 MB21D1Q8N884 522 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 NYAP2Q9P242 653 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
LINC00963-201ENST00000412141 COBLO75128 1261 aa13.8□□□□□ -0.2
LINC00963-201ENST00000412141 SLC3A2P08195 630 aaKnown RBP13.8□□□□□ -0.2
LINC00963-201ENST00000412141 ANO1Q5XXA6 986 aa13.8□□□□□ -0.2
LINC00963-201ENST00000412141 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
LINC00963-201ENST00000412141 PPP1R9AQ9ULJ8 1098 aa13.8□□□□□ -0.2
LINC00963-201ENST00000412141 ROBO3Q96MS0 1386 aa13.8□□□□□ -0.2
LINC00963-201ENST00000412141 IGKV6D-41A0A0C4DH26 115 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 VWA5AO00534 786 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 FOXP2O15409 715 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 STRNO43815 780 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
LINC00963-201ENST00000412141 PGK2P07205 417 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 FCER1AP12319 257 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 STAT3P40763 770 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
LINC00963-201ENST00000412141 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 C7orf61Q8IZ16 206 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 CPXCR1Q8N123 301 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 SLF1Q9BQI6 1058 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 MROH8Q9H579 483 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 C11orf49Q9H6J7 331 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 TOMM22Q9NS69 142 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 MTMR4Q9NYA4 1195 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 OGDHLQ9ULD0 1010 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 MTMR7Q9Y216 660 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 CTDP1Q9Y5B0 961 aaPredicted RBP13.79□□□□□ -0.2
LINC00963-201ENST00000412141 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
LINC00963-201ENST00000412141 TTLL1O95922 423 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 HOXC6P09630 235 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-201ENST00000412141 LHX8Q68G74 356 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 ANKLE1Q8NAG6 615 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 MMP19Q99542 508 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 ZMYND8Q9ULU4 1186 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-201ENST00000412141 RLFQ13129 1914 aa13.78□□□□□ -0.2
LINC00963-201ENST00000412141 TSPY2A6NKD2 308 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
LINC00963-201ENST00000412141 NMT2O60551 498 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 SLC25A27O95847 323 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 NUCB1Q02818 461 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 IKQ13123 557 aaPredicted RBP13.77□□□□□ -0.21
LINC00963-201ENST00000412141 AAMPQ13685 434 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.21
LINC00963-201ENST00000412141 SLFN13Q68D06 897 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.21
LINC00963-201ENST00000412141 ZBED4O75132 1171 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 FGAP02671 866 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 SYN1P17600 705 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 HAND2P61296 217 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 KCTD2Q14681 263 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 SNRNP48Q6IEG0 339 aaKnown RBP13.76□□□□□ -0.21
LINC00963-201ENST00000412141 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
LINC00963-201ENST00000412141 RIOX2Q8IUF8 465 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
LINC00963-201ENST00000412141 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 MKL1Q969V6 931 aa13.76□□□□□ -0.21
LINC00963-201ENST00000412141 RAVER2Q9HCJ3 691 aaKnown RBP13.76□□□□□ -0.21
LINC00963-201ENST00000412141 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms