RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 HAUS7Q99871 368 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 ASPNQ9BXN1 380 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 DDX56Q9NY93 547 aaKnown RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 PFDN2Q9UHV9 154 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 ZMYM5Q9UJ78 669 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 TPX2Q9ULW0 747 aaKnown RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 COL17A1Q9UMD9 1497 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-204ENST00000412061 KDM2BQ8NHM5 1336 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 AGRPO00253 132 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 GATA4P43694 442 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 SLC10A6Q3KNW5 377 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 THAP3Q8WTV1 239 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-204ENST00000412061 VWCEQ96DN2 955 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 COX4I2Q96KJ9 171 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 FBXL18Q96ME1 805 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 APBA2Q99767 749 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 DUSP23Q9BVJ7 150 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 SLKQ9H2G2 1235 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-204ENST00000412061 RAXQ9Y2V3 346 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
BRCA1-204ENST00000412061 DIAPH1O60610 1272 aaKnown RBP6.12□□□□□ -1.43
BRCA1-204ENST00000412061 EOMESO95936 686 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 S100BP04271 92 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-204ENST00000412061 EPHX1P07099 455 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 FAM87AP0C7U9 286 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 SV2CQ496J9 727 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 C2orf27AQ580R0 203 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 ZMYM1Q5SVZ6 1142 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 DCAF15Q66K64 600 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 C7orf61Q8IZ16 206 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 LRRC47Q8N1G4 583 aaKnown RBP6.12□□□□□ -1.43
BRCA1-204ENST00000412061 STAG1Q8WVM7 1258 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 TP53INP1Q96A56 240 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 KLHL25Q9H0H3 589 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 GBP3Q9H0R5 595 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 STOML1Q9UBI4 398 aa6.12□□□□□ -1.43
BRCA1-204ENST00000412061 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 CBFA2T2O43439 604 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 CDC45O75419 566 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 LEFTY1O75610 366 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 AMPD3Q01432 767 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
BRCA1-204ENST00000412061 KRTAP1-3Q8IUG1 177 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 JMYQ8N9B5 988 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 SGSM3Q96HU1 749 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 TBC1D32Q96NH3 1257 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 SPATA9Q9BWV2 254 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 PRDM5Q9NQX1 630 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-204ENST00000412061 FANCLQ9NW38 375 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 MAGEC2Q9UBF1 373 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-204ENST00000412061 SUSD2Q9UGT4 822 aa6.11□□□□□ -1.43
BRCA1-204ENST00000412061 HMX2A2RU54 273 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 PPM1BO75688 479 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 ITGA4P13612 1032 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 CD247P20963 164 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 CYP27C1Q4G0S4 372 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 SFRP5Q5T4F7 317 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 OGFOD3Q6PK18 319 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
BRCA1-204ENST00000412061 ZAR1Q86SH2 424 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 HOMER1Q86YM7 354 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 MORC4Q8TE76 937 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 APPBP2Q92624 585 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 FGD4Q96M96 766 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 KANSL2Q9H9L4 492 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 WHRNQ9P202 907 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 LRP2BPQ9P2M1 347 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 GABBR1Q9UBS5 961 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 FBXL21Q9UKT6 434 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 PCDHB12Q9Y5F1 795 aa6.1□□□□□ -1.43
BRCA1-204ENST00000412061 ESYT3A0FGR9 886 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 KIR3DL1P43629 444 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 CYP27A1Q02318 531 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 LONRF2Q1L5Z9 754 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 RSPO4Q2I0M5 234 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-204ENST00000412061 NBPF9Q3BBW0 867 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 PRR23CQ6ZRP0 262 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 ZSWIM2Q8NEG5 633 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 GATA6Q92908 595 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 PPP1R14AQ96A00 147 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 PRDM16Q9HAZ2 1276 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 GP6Q9HCN6 339 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 TMEM260Q9NX78 707 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 KCNH3Q9ULD8 1083 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 PTCH2Q9Y6C5 1203 aa6.09□□□□□ -1.43
BRCA1-204ENST00000412061 A0A087WZG4 1122 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 IGF2BP3O00425 579 aaKnown RBP eCLIP6.08□□□□□ -1.44
BRCA1-204ENST00000412061 SHOXO15266 292 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 ADMP35318 185 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 GYS2P54840 703 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 SQSTM1Q13501 440 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 ZC3H12BQ5HYM0 836 aaKnown RBP6.08□□□□□ -1.44
BRCA1-204ENST00000412061 NOL9Q5SY16 702 aaKnown RBP6.08□□□□□ -1.44
BRCA1-204ENST00000412061 C22orf34Q6ZV56 151 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms