RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 RNF26Q9BY78 433 aaPredicted RBP23.52■■□□□ 1.36
PTPA-208ENST00000411917 KIF3AQ9Y496 699 aa23.52■■□□□ 1.36
PTPA-208ENST00000411917 CTDNEP1O95476 244 aa23.51■■□□□ 1.35
PTPA-208ENST00000411917 HSP90AA1P07900 732 aaKnown RBP23.51■■□□□ 1.35
PTPA-208ENST00000411917 BMP3P12645 472 aa23.51■■□□□ 1.35
PTPA-208ENST00000411917 FEZ1Q99689 392 aa23.51■■□□□ 1.35
PTPA-208ENST00000411917 NCOA5Q9HCD5 579 aaKnown RBP23.51■■□□□ 1.35
PTPA-208ENST00000411917 UBE2Q2LH0YL09 131 aa23.5■■□□□ 1.35
PTPA-208ENST00000411917 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
PTPA-208ENST00000411917 SPP2Q13103 211 aa23.5■■□□□ 1.35
PTPA-208ENST00000411917 NBPF11Q86T75 865 aa23.5■■□□□ 1.35
PTPA-208ENST00000411917 PROCA1Q8NCQ7 364 aaPredicted RBP23.5■■□□□ 1.35
PTPA-208ENST00000411917 RIOX1Q9H6W3 641 aa23.5■■□□□ 1.35
PTPA-208ENST00000411917 ZNF408Q9H9D4 720 aa23.5■■□□□ 1.35
PTPA-208ENST00000411917 A0A0G2JLL6 359 aaPredicted RBP23.49■■□□□ 1.35
PTPA-208ENST00000411917 KLRF2D3W0D1 207 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 FMNL1O95466 1100 aaPredicted RBP23.49■■□□□ 1.35
PTPA-208ENST00000411917 RXRAP19793 462 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 MTMR2Q13614 643 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 MOB2Q70IA6 237 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 PRRT2Q7Z6L0 340 aaPredicted RBP23.49■■□□□ 1.35
PTPA-208ENST00000411917 TRIM22Q8IYM9 498 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 SLC10A4Q96EP9 437 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.49■■□□□ 1.35
PTPA-208ENST00000411917 SMC3Q9UQE7 1217 aa23.49■■□□□ 1.35
PTPA-208ENST00000411917 PTPDC1A2A3K4 754 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 PRPF3O43395 683 aaKnown RBP23.48■■□□□ 1.35
PTPA-208ENST00000411917 DDIT3P35638 169 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 FMR1Q06787 632 aaKnown RBP eCLIP23.48■■□□□ 1.35
PTPA-208ENST00000411917 FAM160B2Q86V87 743 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 SRBD1Q8N5C6 995 aaKnown RBP23.48■■□□□ 1.35
PTPA-208ENST00000411917 WASF1Q92558 559 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 MTMR8Q96EF0 704 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 CLMNQ96JQ2 1002 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 ELP3Q9H9T3 547 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 EMILIN3Q9NT22 766 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 FEM1BQ9UK73 627 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 CNTNAP5Q8WYK1 1306 aa23.48■■□□□ 1.35
PTPA-208ENST00000411917 PDCP20941 246 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 SAPCD2Q86UD0 394 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 CCDC144CPQ8IYA2 1237 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 STAG2Q8N3U4 1231 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 CHURC1Q8WUH1 139 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 OPTNQ96CV9 577 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 TMOD4Q9NZQ9 345 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 CIZ1Q9ULV3 898 aaPredicted RBP23.47■■□□□ 1.35
PTPA-208ENST00000411917 TLL2Q9Y6L7 1015 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 MYPNQ86TC9 1320 aa23.47■■□□□ 1.35
PTPA-208ENST00000411917 hCG_1984214I3L0E3 225 aa23.46■■□□□ 1.35
PTPA-208ENST00000411917 IRF6O14896 467 aa23.46■■□□□ 1.35
PTPA-208ENST00000411917 DEXIO95424 95 aa23.46■■□□□ 1.35
PTPA-208ENST00000411917 FDX1P10109 184 aa23.46■■□□□ 1.35
PTPA-208ENST00000411917 SSRP1Q08945 709 aaKnown RBP23.46■■□□□ 1.35
PTPA-208ENST00000411917 KIAA1755Q5JYT7 1200 aa23.46■■□□□ 1.35
PTPA-208ENST00000411917 CCDC84Q86UT8 332 aaPredicted RBP23.46■■□□□ 1.35
PTPA-208ENST00000411917 RAB11FIP4Q86YS3 637 aa23.46■■□□□ 1.35
PTPA-208ENST00000411917 ZNF713Q8N859 430 aaPredicted RBP23.46■■□□□ 1.35
PTPA-208ENST00000411917 TRIM75PA6NK02 468 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 PLEKHA8P1O95397 391 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 VCAM1P19320 739 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 STAT2P52630 851 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 SNAPC2Q13487 334 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 CCDC96Q2M329 555 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 FASTKD5Q7L8L6 764 aaKnown RBP23.45■■□□□ 1.34
PTPA-208ENST00000411917 TEX2Q8IWB9 1127 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 OTUD5Q96G74 571 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 WNK4Q96J92 1243 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 LOC285556D6RIA3 1793 aa23.45■■□□□ 1.34
PTPA-208ENST00000411917 TMEM88BA6NKF7 163 aa23.44■■□□□ 1.34
PTPA-208ENST00000411917 FDPSP14324 419 aaKnown RBP23.44■■□□□ 1.34
PTPA-208ENST00000411917 GJB2P29033 226 aa23.44■■□□□ 1.34
PTPA-208ENST00000411917 HOXA7P31268 230 aaPredicted RBP23.44■■□□□ 1.34
PTPA-208ENST00000411917 HUNKP57058 714 aa23.44■■□□□ 1.34
PTPA-208ENST00000411917 ORC3Q9UBD5 711 aaPredicted RBP23.44■■□□□ 1.34
PTPA-208ENST00000411917 PNMA2Q9UL42 364 aa23.44■■□□□ 1.34
PTPA-208ENST00000411917 SLC45A1Q9Y2W3 748 aa23.44■■□□□ 1.34
PTPA-208ENST00000411917 CYTH3O43739 400 aa23.43■■□□□ 1.34
PTPA-208ENST00000411917 GTF2A2P52657 109 aa23.43■■□□□ 1.34
PTPA-208ENST00000411917 HMGCS2P54868 508 aa23.43■■□□□ 1.34
PTPA-208ENST00000411917 AKAP17AQ02040 695 aaKnown RBP23.43■■□□□ 1.34
PTPA-208ENST00000411917 SPRYD7Q5W111 196 aa23.43■■□□□ 1.34
PTPA-208ENST00000411917 FRMPD2Q68DX3 1309 aaPredicted RBP23.42■■□□□ 1.34
PTPA-208ENST00000411917 TMEM232C9JQI7 657 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 JAK2O60674 1132 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 GOLGA8HP0CJ92 632 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 GJA5P36382 358 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 TRAF1Q13077 416 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 PFKFB3Q16875 520 aaPredicted RBP23.42■■□□□ 1.34
PTPA-208ENST00000411917 SLC35G1Q2M3R5 365 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 FAM83BQ5T0W9 1011 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 SYDE2Q5VT97 1194 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 KCTD1Q719H9 257 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 SH3GLB2Q9NR46 395 aa23.42■■□□□ 1.34
PTPA-208ENST00000411917 PTPRFP10586 1907 aa23.41■■□□□ 1.34
PTPA-208ENST00000411917 USP17L15C9J2P7 530 aa23.41■■□□□ 1.34
PTPA-208ENST00000411917 USP17L13C9JLJ4 530 aa23.41■■□□□ 1.34
PTPA-208ENST00000411917 USP17L11C9JVI0 530 aa23.41■■□□□ 1.34
PTPA-208ENST00000411917 USP17L18D6R9N7 530 aa23.41■■□□□ 1.34
PTPA-208ENST00000411917 USP17L22D6RA61 530 aa23.41■■□□□ 1.34
PTPA-208ENST00000411917 USP17L17D6RBQ6 530 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms