RNA–Protein interactions for RNA: ENST00000410519.1

RN7SKP143-201, Transcript of RNA, 7SK small nuclear pseudogene 143, humanhuman

BASIC

Gene RN7SKP143, Length 310 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP143-201ENST00000410519 RXRAP19793 462 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 NUBP1P53384 320 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 RCAN1P53805 252 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 KLRC3Q07444 240 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 TROAPQ12815 778 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 ME3Q16798 604 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 SPRYD7Q5W111 196 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 USP17L2Q6R6M4 530 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 ZNF274Q96GC6 653 aaPredicted RBP12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
RN7SKP143-201ENST00000410519 A0A0G2JLL6 359 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CXCL11O14625 94 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 SLC10A3P09131 477 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CALM1P0DP23 149 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CALM2P0DP24 149 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CALM3P0DP25 149 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 ZBTB48P10074 688 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 PDHBP11177 359 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 TIE1P35590 1138 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 HMGCS2P54868 508 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 STK3Q13188 491 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 DGKZQ13574 1117 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 GRM4Q14833 912 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CCDC96Q2M329 555 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 SH3D19Q5HYK7 790 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 PRRT2Q7Z6L0 340 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 HSCBQ8IWL3 235 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CTCFLQ8NI51 663 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 LPAR1Q92633 364 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 C12orf42Q96LP6 360 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
RN7SKP143-201ENST00000410519 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 K7ELQ4 463 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 WDR46O15213 610 aaKnown RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 PFKFB2O60825 505 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 VCAM1P19320 739 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 KIF5BP33176 963 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 SLC1A4P43007 532 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 CCT2P78371 535 aaKnown RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 SNAPC2Q13487 334 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 RTN1Q16799 776 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 TMOD4Q9NZQ9 345 aa12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 RBM19Q9Y4C8 960 aaKnown RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP143-201ENST00000410519 PARP14Q460N5 1801 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 GOLGA8HP0CJ92 632 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 BMP3P12645 472 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 CDC27P30260 824 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 GTF2A2P52657 109 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 C1QTNF8P60827 252 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 SCRN1Q12765 414 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 FAM83BQ5T0W9 1011 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 GADL1Q6ZQY3 521 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 KCTD1Q719H9 257 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 FANCBQ8NB91 859 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 NCOA5Q9HCD5 579 aaKnown RBP12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 RBM28Q9NW13 759 aaKnown RBP12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 MAD2L2Q9UI95 211 aa12.09□□□□□ -0.47
RN7SKP143-201ENST00000410519 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 FAM155AB1AL88 458 aaPredicted RBP12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 MOGSQ13724 837 aa12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
RN7SKP143-201ENST00000410519 CCDC83Q8IWF9 413 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms