RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 RPS26P62854 115 aaKnown RBP3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ADAM17P78536 824 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FANCCQ00597 558 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SNX17Q15036 470 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ADGRF1Q5T601 910 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZBTB37Q5TC79 503 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 NT5DC4Q86YG4 428 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZFPM1Q8IX07 1006 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 RIN3Q8TB24 985 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SREK1Q8WXA9 508 aaKnown RBP3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 C6P13671 934 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TPP2P29144 1249 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TAGLNQ01995 201 aaKnown RBP3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 COL9A2Q14055 689 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 NR0B2Q15466 257 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZFYVE27Q5T4F4 411 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SIRT2Q8IXJ6 389 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 DHX38Q92620 1227 aaKnown RBP3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 DRC1Q96MC2 740 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 PWWP2AQ96N64 755 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 RSRP1Q9BUV0 290 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 OSBPL7Q9BZF2 842 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CBX8Q9HC52 389 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 IGSF5Q9NSI5 407 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 INPP5FQ9Y2H2 1132 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 UNC13AQ9UPW8 1703 aa3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZCCHC6Q5VYS8 1495 aaKnown RBP3.98□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SCRIBQ14160 1630 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 BPNT1O95861 308 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 KCNC1P48547 511 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 HDLBPQ00341 1268 aaKnown RBP3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 RING1Q06587 406 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 EGR3Q06889 387 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 MLECQ14165 292 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 NAALADL2Q58DX5 795 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SOGA3Q5TF21 947 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZNF746Q6NUN9 644 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 LETMD1Q6P1Q0 360 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 MPRIPQ6WCQ1 1025 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FERMT3Q86UX7 667 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FAM129CQ86XR2 697 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SPPL2CQ8IUH8 684 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 KIAA0825Q8IV33 1275 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TMEFF1Q8IYR6 380 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SLC43A3Q8NBI5 491 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TP53I13Q8NBR0 393 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZNF507Q8TCN5 953 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 UBXN4Q92575 508 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ARMC5Q96C12 935 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SYTL4Q96C24 671 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CNTD2Q9H8S5 307 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SMPD4Q9NXE4 827 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 USP35Q9P2H5 1018 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 STRIP2Q9ULQ0 834 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CYP8B1Q9UNU6 501 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SUPT16HQ9Y5B9 1047 aaKnown RBP3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 NCAPD3P42695 1498 aa3.97□□□□□ -1.77
RNU6-1140P-201ENST00000410517 IRS4O14654 1257 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CYP7A1P22680 504 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TGM1P22735 817 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 GBP2P32456 591 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 KIR3DL1P43629 444 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ARID5AQ03989 594 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SNAP47Q5SQN1 464 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PI16Q6UXB8 463 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TPTE2Q6XPS3 522 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 LSRQ86X29 649 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SHISA4Q96DD7 197 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SETDB2Q96T68 719 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MIR1-1HGQ9H1L0 117 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 DUSP13Q9UII6 198 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ROBO2Q9HCK4 1378 aa3.96□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ATP2B1P20020 1258 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NME2P22392 152 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 VIPR1P32241 457 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 LIG3P49916 1009 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MEI1Q5TIA1 1274 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TTBK2Q6IQ55 1244 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CCDC84Q86UT8 332 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MFSD2AQ8NA29 543 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 VWCEQ96DN2 955 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TMEM74Q96NL1 305 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SPON2Q9BUD6 331 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TANGO6Q9C0B7 1094 aa3.95□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CYR61O00622 381 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SSBP05455 408 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CTSHP09668 335 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 IMPDH2P12268 514 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TACR2P21452 398 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CDR1P51861 262 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SLURP1P55000 103 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 LMNB2Q03252 620 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CHRNEQ04844 493 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ZNF252P-AS1Q0IIN9 211 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SLBPQ14493 270 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CWF19L2Q2TBE0 894 aaKnown RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 GAB4Q2WGN9 574 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CPZQ66K79 652 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 LLGL2Q6P1M3 1020 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms