RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 NT5C1AQ9BXI3 368 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 HDAC8Q9BY41 377 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 BACH2Q9BYV9 841 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 FOXP3Q9BZS1 431 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 BCL11AQ9H165 835 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 EPB41L4BQ9H329 900 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 MINPP1Q9UNW1 487 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZBTB7CA1YPR0 619 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 FITM1A5D6W6 292 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 FAM86C2PA6NEL3 165 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 NOTOA8MTQ0 251 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 PSPNO60542 156 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 FKTNO75072 461 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 PRAMEF1O95521 474 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 EFEMP2O95967 443 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 NME1P15531 152 aaKnown RBP3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 CFPP27918 469 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF76P36508 570 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF165P49910 485 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 FANCCQ00597 558 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 NR0B2Q15466 257 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF394Q53GI3 561 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZPBP2Q6X784 338 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 SPOCD1Q6ZMY3 1216 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 WAPLQ7Z5K2 1190 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 SLITRK4Q8IW52 837 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 TMEM192Q8IY95 271 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 DAGLBQ8NCG7 672 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 ENOX1Q8TC92 643 aaKnown RBP3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 LINC01599Q8WXQ3 324 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 PPP1R16BQ96T49 567 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 SLC9A7Q96T83 725 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 PRDM14Q9GZV8 571 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 GPR160Q9UJ42 338 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 TCFL5Q9UL49 500 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF281Q9Y2X9 895 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 PCDHGB7Q9Y5F8 929 aa3.55□□□□□ -1.84
RNU2-54P-201ENST00000410299 TMEM82A0PJX8 343 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 NPIPB6E9PJ23 425 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 ETV2O00321 342 aaPredicted RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 MEIS1O00470 390 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 NFIBO00712 420 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 USP2O75604 605 aaPredicted RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 SYPP08247 313 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 TMEM253P0C7T8 217 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 ACRP10323 421 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 MFAP1P55081 439 aaKnown RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 PCBP3P57721 371 aaKnown RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 CHRNEQ04844 493 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 RAD51AP2Q09MP3 1159 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 DUSP4Q13115 394 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 BBS9Q3SYG4 887 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 RNF111Q6ZNA4 994 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 ATG14Q6ZNE5 492 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 USP48Q86UV5 1035 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 ANKLE2Q86XL3 938 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 SPPL2CQ8IUH8 684 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 SIRT2Q8IXJ6 389 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 LRRC56Q8IYG6 542 aaPredicted RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 LILRA2Q8N149 483 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF655Q8N720 491 aaPredicted RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 SHISA4Q96DD7 197 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 SLC6A18Q96N87 628 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 MKRN2Q9H000 416 aaKnown RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZMYM5Q9UJ78 669 aa3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 YBX2Q9Y2T7 364 aaKnown RBP3.54□□□□□ -1.84
RNU2-54P-201ENST00000410299 SSU72P8A0A1W2PR75 194 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 MEIS3P2A8K0S8 358 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 TNFRSF10CO14798 259 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 SIGLEC6O43699 453 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 PDE6BP35913 854 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 CCNFP41002 786 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 RACK1P63244 317 aaKnown RBP3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 LRRFIP1Q32MZ4 808 aaKnown RBP3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF605Q86T29 641 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 C1QL4Q86Z23 238 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 ANKS4BQ8N8V4 417 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 LINC00116Q8NCU8 138 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 KCNN1Q92952 543 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 INTS4Q96HW7 963 aaKnown RBP3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 MAP6Q96JE9 813 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 TOX2Q96NM4 488 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 SLC6A17Q9H1V8 727 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 CWC22Q9HCG8 908 aaKnown RBP3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 CHST7Q9NS84 486 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 GFOD1Q9NXC2 390 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 FBXL21Q9UKT6 434 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNRF3Q9ULT6 936 aa3.53□□□□□ -1.84
RNU2-54P-201ENST00000410299 MYOCOSA0A1B0GUC4 107 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 C9IYK1 514 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 MED14OSP0DP75 135 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 SDHBP21912 280 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 CTSKP43235 329 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 AUHQ13825 339 aaKnown RBP3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 SNX17Q15036 470 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 SLC14A2Q15849 920 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 FBXW10Q5XX13 1052 aa3.52□□□□□ -1.85
RNU2-54P-201ENST00000410299 LCNL1Q6ZST4 164 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms