RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CBFA2T2O43439 604 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 ATP2C1P98194 919 aaPredicted RBP15.49■□□□□ 0.07
LIMS1-205ENST00000410093 HDLBPQ00341 1268 aaKnown RBP15.49■□□□□ 0.07
LIMS1-205ENST00000410093 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
LIMS1-205ENST00000410093 DPCR1Q3MIW9 517 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 DPP8Q6V1X1 898 aaPredicted RBP15.49■□□□□ 0.07
LIMS1-205ENST00000410093 PODNQ7Z5L7 613 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 AOPEPQ8N6M6 819 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 OXER1Q8TDS5 423 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 NAP1L5Q96NT1 182 aaPredicted RBP15.49■□□□□ 0.07
LIMS1-205ENST00000410093 CLIC6Q96NY7 704 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 NMT2O60551 498 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
LIMS1-205ENST00000410093 MYL5Q02045 173 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 POSTNQ15063 836 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 LONRF3Q496Y0 759 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 BLIDQ8IZY5 108 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 TTC12Q9H892 705 aaPredicted RBP15.48■□□□□ 0.07
LIMS1-205ENST00000410093 MAD2L2Q9UI95 211 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 NRDCO43847 1150 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 PLCD1P51178 756 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 GTF2IP78347 998 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 NPY5RQ15761 445 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 GRIK5Q16478 980 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 CC2D2BQ6DHV5 1058 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 DPY19L2Q6NUT2 758 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 METTL16Q86W50 562 aaKnown RBP15.48■□□□□ 0.07
LIMS1-205ENST00000410093 SPC24Q8NBT2 197 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 SMARCE1Q969G3 411 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 DYNLL2Q96FJ2 89 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 TMEM47Q9BQJ4 181 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 DAGLAQ9Y4D2 1042 aa15.48■□□□□ 0.07
LIMS1-205ENST00000410093 COL11A2P13942 1736 aaPredicted RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 G3V3G9 751 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 NFKBIEO00221 500 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 POLR2DO15514 142 aaKnown RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 PARP1P09874 1014 aaKnown RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 SLFN14P0C7P3 912 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 GNA11P29992 359 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 LONP1P36776 959 aaKnown RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 SARSP49591 514 aaKnown RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 RTKN2Q8IZC4 609 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 SPATA20Q8TB22 786 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 OSBPL5Q9H0X9 879 aaPredicted RBP15.47■□□□□ 0.07
LIMS1-205ENST00000410093 BARHL2Q9NY43 387 aa15.47■□□□□ 0.07
LIMS1-205ENST00000410093 TXLNAP40222 546 aa15.46■□□□□ 0.07
LIMS1-205ENST00000410093 TEKT1Q969V4 418 aa15.46■□□□□ 0.07
LIMS1-205ENST00000410093 GPR101Q96P66 508 aaPredicted RBP15.46■□□□□ 0.07
LIMS1-205ENST00000410093 CSRNP2Q9H175 543 aa15.46■□□□□ 0.07
LIMS1-205ENST00000410093 EHD4Q9H223 541 aa15.46■□□□□ 0.07
LIMS1-205ENST00000410093 STX8Q9UNK0 236 aa15.46■□□□□ 0.07
LIMS1-205ENST00000410093 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
LIMS1-205ENST00000410093 LTBP3Q9NS15 1303 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 KIF3CO14782 793 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 ACTN4O43707 911 aaKnown RBP15.45■□□□□ 0.06
LIMS1-205ENST00000410093 TOMM70O94826 608 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 PTGS1P23219 599 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 ERCC5P28715 1186 aaPredicted RBP15.45■□□□□ 0.06
LIMS1-205ENST00000410093 GABPAQ06546 454 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 ASPRV1Q53RT3 343 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 IQUBQ8NA54 791 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 CCDC150Q8NCX0 1101 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 SHISA4Q96DD7 197 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
LIMS1-205ENST00000410093 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 NMRK2Q9NPI5 230 aa15.45■□□□□ 0.06
LIMS1-205ENST00000410093 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
LIMS1-205ENST00000410093 CCDC194A0A1B0GVG4 234 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 MYL1P05976 194 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 HLA-DOAP06340 250 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 PRPHP41219 470 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 EVX2Q03828 476 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 PNOCQ13519 176 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 MORC3Q14149 939 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 NCAPHQ15003 741 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 KRT25Q7Z3Z0 450 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 ENOX1Q8TC92 643 aaKnown RBP15.44■□□□□ 0.06
LIMS1-205ENST00000410093 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 GTPBP4Q9BZE4 634 aaKnown RBP15.44■□□□□ 0.06
LIMS1-205ENST00000410093 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
LIMS1-205ENST00000410093 RRAGCQ9HB90 399 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 C6orf50Q9HD87 102 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 KCND1Q9NSA2 647 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
LIMS1-205ENST00000410093 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms