RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 KRT84Q9NSB2 600 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 GJA3Q9Y6H8 435 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ANKRD33BA6NCL7 494 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 GOLGA8BA8MQT2 603 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CASQ2O14958 399 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 MAP3K7O43318 606 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SULT1B1O43704 296 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 EVI5O60447 810 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SUPT3HO75486 399 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 POLR3DP05423 398 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ATXN8OSP0DMR3 200 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ZNF3P17036 446 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CTNNA2P26232 953 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ZNF132P52740 706 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ATXN3P54252 364 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 PSME1Q06323 249 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SEMA3AQ14563 771 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SPATA1Q5VX52 437 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 FAM186BQ8IYM0 893 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 IPCEF1Q8WWN9 437 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SCG3Q8WXD2 468 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CCDC77Q9BR77 488 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 MIS12Q9H081 205 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 HOMER3Q9NSC5 361 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 COX16Q9P0S2 106 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CTTNBP2NLQ9P2B4 639 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SLC4A4Q9Y6R1 1079 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 A6NNZ2 444 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 NBNO60934 754 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 MYBL2P10244 700 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 EEF1GP26641 437 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SULT1E1P49888 294 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 STAT2P52630 851 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 PMS2P54278 862 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CLUL1Q15846 466 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 TUBB8Q3ZCM7 444 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ZC3H12BQ5HYM0 836 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 TTC39BQ5VTQ0 682 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 LRRC49Q8IUZ0 686 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 RBM12BQ8IXT5 1001 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 TEX9Q8N6V9 391 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SIRT1Q96EB6 747 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CCDC43Q96MW1 224 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ACAP3Q96P50 834 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 NAA15Q9BXJ9 866 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 BRD9Q9H8M2 597 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CHMP1AQ9HD42 196 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ANGPTL2Q9UKU9 493 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 EIF3AQ14152 1382 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 OPA1O60313 960 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 KRT6AP02538 564 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 KRT6BP04259 564 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 LDHBP07195 334 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ACTN1P12814 892 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 KRT6CP48668 564 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 ATP11AP98196 1134 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 CCDC102BQ68D86 513 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 PCGF5Q86SE9 256 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 LUZP2Q86TE4 346 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 TSR2Q969E8 191 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 HPS3Q969F9 1004 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SH3GLB2Q9NR46 395 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 THEGQ9P2T0 379 aa5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 SRP68Q9UHB9 627 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-204ENST00000410054 RAD54L2Q9Y4B4 1467 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 H0Y626 953 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 MCF2LO15068 1137 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 MBD4O95243 580 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 TRIM16O95361 564 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 LCA5LO95447 670 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 MBD3O95983 291 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 AGR2O95994 175 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 HSMCR30P0CW71 290 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 PRIM1P49642 420 aaKnown RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 ARMC6Q6NXE6 501 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 CENPQQ7L2Z9 268 aaPredicted RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 KRT74Q7RTS7 529 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 NLRP7Q8WX94 980 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 POMGNT1Q8WZA1 660 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 GLMNQ92990 594 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 OLFM1Q99784 485 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 SENP7Q9BQF6 1050 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 ADNPQ9H2P0 1102 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 TCP11L1Q9NUJ3 509 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 DNAJC17Q9NVM6 304 aaKnown RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 NDE1Q9NXR1 346 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 STIM2Q9P246 746 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 SUCLA2Q9P2R7 463 aaPredicted RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 RCAN3Q9UKA8 241 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.76□□□□□ -1.491e-6■■■□□ 16.9
R3HDM1-204ENST00000410054 NUTM2BA6NNL0 878 aaPredicted RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 NUTM2EB1AL46 878 aaPredicted RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 TBC1D12O60347 775 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 CENPAP49450 140 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 CSE1LP55060 971 aaKnown RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 DHX9Q08211 1270 aaKnown RBP5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 RALGDSQ12967 914 aa5.76□□□□□ -1.49
R3HDM1-204ENST00000410054 CCDC153Q494R4 210 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms