RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 IQCA1Q86XH1 822 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 KCNB2Q92953 911 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 MCOLN1Q9GZU1 580 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 ZSWIM5Q9P217 1185 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
GYPC-203ENST00000409836 SLC27A2O14975 620 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 ATP2A1O14983 1001 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 FLOT1O75955 427 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 FCGRTP55899 365 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 SEC23AQ15436 765 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
GYPC-203ENST00000409836 FAM83BQ5T0W9 1011 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
GYPC-203ENST00000409836 ENAHQ8N8S7 591 aaPredicted RBP16.49■□□□□ 0.23
GYPC-203ENST00000409836 REPS2Q8NFH8 660 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 GPRC5AQ8NFJ5 357 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 DCAF4Q8WV16 495 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 TMEM47Q9BQJ4 181 aa16.49■□□□□ 0.23
GYPC-203ENST00000409836 REC8O95072 547 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 PSMC4P43686 418 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
GYPC-203ENST00000409836 TNS4Q8IZW8 715 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 NCOA7Q8NI08 942 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 ZSCAN10Q96SZ4 725 aaPredicted RBP16.48■□□□□ 0.23
GYPC-203ENST00000409836 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 SRRDQ9UH36 339 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 PTPN22Q9Y2R2 807 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 TRIM17Q9Y577 477 aa16.48■□□□□ 0.23
GYPC-203ENST00000409836 TNKSO95271 1327 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 VWA5AO00534 786 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 FDX1P10109 184 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 BMP3P12645 472 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 MAPK4P31152 587 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 TRDNQ13061 729 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 IRF5Q13568 498 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 BTNL9Q6UXG8 535 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
GYPC-203ENST00000409836 ZNF214Q9UL59 606 aaPredicted RBP16.47■□□□□ 0.23
GYPC-203ENST00000409836 WDR19Q8NEZ3 1342 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 PDHBP11177 359 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 STAT2P52630 851 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 ANTXR2P58335 489 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 CCNA1P78396 465 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 RALYLQ86SE5 291 aaKnown RBP16.46■□□□□ 0.23
GYPC-203ENST00000409836 FAM160B2Q86V87 743 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 PRPF38AQ8NAV1 312 aaKnown RBP16.46■□□□□ 0.23
GYPC-203ENST00000409836 SOCS4Q8WXH5 440 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 ARMC5Q96C12 935 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 NUP88Q99567 741 aaPredicted RBP16.46■□□□□ 0.23
GYPC-203ENST00000409836 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 SPATC1LQ9H0A9 340 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 PORCNQ9H237 461 aa16.46■□□□□ 0.23
GYPC-203ENST00000409836 BRCA2P51587 3418 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
GYPC-203ENST00000409836 HOXD10P28358 340 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 COPB2P35606 906 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 SLC1A4P43007 532 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 OAZ1P54368 228 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 USP6NLQ92738 828 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
GYPC-203ENST00000409836 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
GYPC-203ENST00000409836 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 HSPA4P34932 840 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 TMEM132BQ14DG7 1078 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 Q3C1V9 767 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
GYPC-203ENST00000409836 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 PNMA1Q8ND90 353 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 ABHD8Q96I13 439 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 PAGR1Q9BTK6 254 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 GJD2Q9UKL4 321 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
GYPC-203ENST00000409836 MYH6P13533 1939 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 PEX10O60683 326 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 FMNL1O95466 1100 aaPredicted RBP16.43■□□□□ 0.22
GYPC-203ENST00000409836 XRCC5P13010 732 aaKnown RBP16.43■□□□□ 0.22
GYPC-203ENST00000409836 PRKCZQ05513 592 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 KRT32Q14532 448 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 MORN1Q5T089 497 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 GPR142Q7Z601 462 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 ABRAQ8N0Z2 381 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 COA7Q96BR5 231 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
GYPC-203ENST00000409836 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
GYPC-203ENST00000409836 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms