RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 U3KPZ7 1027 aaPredicted RBP36.8■■■■□ 3.48
TRAF3IP1-203ENST00000409739 COA7Q96BR5 231 aa36.79■■■■□ 3.48
TRAF3IP1-203ENST00000409739 PORCNQ9H237 461 aa36.79■■■■□ 3.48
TRAF3IP1-203ENST00000409739 SAMD1Q6SPF0 538 aaPredicted RBP36.78■■■■□ 3.48
TRAF3IP1-203ENST00000409739 RBBP6Q7Z6E9 1792 aaKnown RBP36.77■■■■□ 3.48
TRAF3IP1-203ENST00000409739 B4E1Z4 1266 aa36.77■■■■□ 3.48
TRAF3IP1-203ENST00000409739 NT5C2P49902 561 aa36.77■■■■□ 3.48
TRAF3IP1-203ENST00000409739 SLFN13Q68D06 897 aa36.77■■■■□ 3.48
TRAF3IP1-203ENST00000409739 MAP4K1Q92918 833 aa36.77■■■■□ 3.48
TRAF3IP1-203ENST00000409739 PPP1R9AQ9ULJ8 1098 aa36.77■■■■□ 3.48
TRAF3IP1-203ENST00000409739 CDC45O75419 566 aa36.76■■■■□ 3.48
TRAF3IP1-203ENST00000409739 CYP21A2P08686 494 aa36.76■■■■□ 3.48
TRAF3IP1-203ENST00000409739 MB21D1Q8N884 522 aa36.76■■■■□ 3.48
TRAF3IP1-203ENST00000409739 RAET1EQ8TD07 263 aa36.76■■■■□ 3.48
TRAF3IP1-203ENST00000409739 LSG1Q9H089 658 aaKnown RBP36.76■■■■□ 3.48
TRAF3IP1-203ENST00000409739 KDM4AO75164 1064 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 MAPK4P31152 587 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 FLT3LGP49771 235 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 CCNA1P78396 465 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 SLC9C1Q4G0N8 1177 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 KIAA1211Q6ZU35 1233 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ARMC5Q96C12 935 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ADAMTS5Q9UNA0 930 aa36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 RBM8AQ9Y5S9 174 aaKnown RBP36.75■■■■□ 3.47
TRAF3IP1-203ENST00000409739 SLF1Q9BQI6 1058 aa36.74■■■■□ 3.47
TRAF3IP1-203ENST00000409739 CNNM2Q9H8M5 875 aa36.74■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ZNFX1Q9P2E3 1918 aaKnown RBP36.74■■■■□ 3.47
TRAF3IP1-203ENST00000409739 RCSD1Q6JBY9 416 aa36.73■■■■□ 3.47
TRAF3IP1-203ENST00000409739 GMCL1Q96IK5 515 aa36.73■■■■□ 3.47
TRAF3IP1-203ENST00000409739 KRT23Q9C075 422 aa36.73■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ZNF236Q9UL36 1845 aa36.73■■■■□ 3.47
TRAF3IP1-203ENST00000409739 TOP1P11387 765 aaKnown RBP36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 BMP3P12645 472 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 RASGRP2Q7LDG7 609 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 GPR142Q7Z601 462 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 CCAR1Q8IX12 1150 aaKnown RBP36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 TMEM47Q9BQJ4 181 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ZKSCAN3Q9BRR0 538 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 SPATC1LQ9H0A9 340 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 TAF6LQ9Y6J9 622 aa36.72■■■■□ 3.47
TRAF3IP1-203ENST00000409739 IRF5Q13568 498 aa36.71■■■■□ 3.47
TRAF3IP1-203ENST00000409739 CASC1Q6TDU7 716 aa36.71■■■■□ 3.47
TRAF3IP1-203ENST00000409739 SH3TC2Q8TF17 1288 aa36.71■■■■□ 3.47
TRAF3IP1-203ENST00000409739 GJD2Q9UKL4 321 aa36.71■■■■□ 3.47
TRAF3IP1-203ENST00000409739 KIAA0100Q14667 2235 aaKnown RBP36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 VWA5AO00534 786 aa36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 IQCA1Q86XH1 822 aa36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 CHMP4CQ96CF2 233 aa36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 TTC14Q96N46 770 aa36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 MOV10L1Q9BXT6 1211 aaKnown RBP36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ANO2Q9NQ90 1003 aa36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 ZSWIM5Q9P217 1185 aa36.7■■■■□ 3.47
TRAF3IP1-203ENST00000409739 MCCP23508 829 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 SLC1A4P43007 532 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 TMEM132BQ14DG7 1078 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 PLEKHH3Q7Z736 793 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 REPS2Q8NFH8 660 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ZNF333Q96JL9 665 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 FEM1BQ9UK73 627 aa36.69■■■■□ 3.46
TRAF3IP1-203ENST00000409739 GRK4P32298 578 aa36.68■■■■□ 3.46
TRAF3IP1-203ENST00000409739 NBPF11Q86T75 865 aa36.68■■■■□ 3.46
TRAF3IP1-203ENST00000409739 PRPF38AQ8NAV1 312 aaKnown RBP36.68■■■■□ 3.46
TRAF3IP1-203ENST00000409739 SOCS4Q8WXH5 440 aa36.68■■■■□ 3.46
TRAF3IP1-203ENST00000409739 MTMR7Q9Y216 660 aa36.68■■■■□ 3.46
TRAF3IP1-203ENST00000409739 BRCA2P51587 3418 aa36.67■■■■□ 3.46
TRAF3IP1-203ENST00000409739 PLS1Q14651 629 aa36.67■■■■□ 3.46
TRAF3IP1-203ENST00000409739 WDR78Q5VTH9 848 aa36.67■■■■□ 3.46
TRAF3IP1-203ENST00000409739 SLAIN1Q8ND83 568 aa36.67■■■■□ 3.46
TRAF3IP1-203ENST00000409739 CWC22Q9HCG8 908 aaKnown RBP36.67■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ISY1Q9ULR0 285 aaKnown RBP36.67■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ADCY3O60266 1144 aa36.66■■■■□ 3.46
TRAF3IP1-203ENST00000409739 STOX1Q6ZVD7 989 aa36.66■■■■□ 3.46
TRAF3IP1-203ENST00000409739 SHCBP1Q8NEM2 672 aa36.66■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ZSCAN10Q96SZ4 725 aaPredicted RBP36.66■■■■□ 3.46
TRAF3IP1-203ENST00000409739 NUDT12Q9BQG2 462 aa36.66■■■■□ 3.46
TRAF3IP1-203ENST00000409739 TMEM232C9JQI7 657 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 E7EWF7 191 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 STAT2P52630 851 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 TRDNQ13061 729 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 CCDC178Q5BJE1 867 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 MORN1Q5T089 497 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 KCTD1Q719H9 257 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 DGKHQ86XP1 1220 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 DCAF4Q8WV16 495 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 KIFC2Q96AC6 838 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ZNF214Q9UL59 606 aaPredicted RBP36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 PLXNA1Q9UIW2 1896 aa36.65■■■■□ 3.46
TRAF3IP1-203ENST00000409739 TNKSO95271 1327 aa36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ELNP15502 786 aa36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ERCC3P19447 782 aa36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 SOX10P56693 466 aa36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 CYB5R4Q7L1T6 521 aa36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 ENAHQ8N8S7 591 aaPredicted RBP36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 PXYLP1Q8TE99 480 aa36.64■■■■□ 3.46
TRAF3IP1-203ENST00000409739 CCDC96Q2M329 555 aa36.63■■■■□ 3.45
TRAF3IP1-203ENST00000409739 USP6NLQ92738 828 aa36.63■■■■□ 3.45
TRAF3IP1-203ENST00000409739 UBAC1Q9BSL1 405 aa36.63■■■■□ 3.45
TRAF3IP1-203ENST00000409739 PLA2G6O60733 806 aa36.62■■■■□ 3.45
TRAF3IP1-203ENST00000409739 PTPREP23469 700 aa36.62■■■■□ 3.45
TRAF3IP1-203ENST00000409739 FAM160B2Q86V87 743 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms