RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 A0A087WUV0 522 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-205ENST00000409455 WTIPA6NIX2 430 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-205ENST00000409455 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 SYF2O95926 243 aaKnown RBP17.42■□□□□ 0.38
LIMS2-205ENST00000409455 GYS1P13807 737 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 FECHP22830 423 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 ARID4AP29374 1257 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-205ENST00000409455 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
LIMS2-205ENST00000409455 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
LIMS2-205ENST00000409455 SPATA20Q8TB22 786 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 WASF1Q92558 559 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 NCAPGQ9BPX3 1015 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 ITIH6Q6UXX5 1313 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 ACTN4O43707 911 aaKnown RBP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 MYCBPQ99417 103 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 SLC26A6Q9BXS9 759 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 LAMB2P55268 1798 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 SEMA3EO15041 775 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 PRPF6O94906 941 aaKnown RBP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 APBA3O96018 575 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 BCAMP50895 628 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 FXR1P51114 621 aaKnown RBP eCLIP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 RPS8P62241 208 aaKnown RBP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 AMPD2Q01433 879 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 SSRP1Q08945 709 aaKnown RBP17.41■□□□□ 0.38
LIMS2-205ENST00000409455 CYP26C1Q6V0L0 522 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 CYB5R4Q7L1T6 521 aa17.41■□□□□ 0.38
LIMS2-205ENST00000409455 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 STX17P56962 302 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 NTRK3Q16288 839 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 CDKAL1Q5VV42 579 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 MMS22LQ6ZRQ5 1243 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 HPCAL4Q9UM19 191 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 BTBD18B2RXH4 712 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 TM4SF1P30408 202 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 ARHGAP25P42331 645 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 TMEM87BQ96K49 555 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 ABHD10Q9NUJ1 306 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 CEP131Q9UPN4 1083 aa17.4■□□□□ 0.38
LIMS2-205ENST00000409455 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 ABL1P00519 1130 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 MMP1P03956 469 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 USP14P54578 494 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 ERVK-24P63145 666 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 RASGRF1Q13972 1273 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 TBC1D10CQ8IV04 446 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 DIS3L2Q8IYB7 885 aaKnown RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 NBPF3Q9H094 633 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 PIH1D3Q9NQM4 214 aaKnown RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 DENND2AQ9ULE3 1009 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 TAF1P21675 1872 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 PLSCR1O15162 318 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 STIM1Q13586 685 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 COG1Q8WTW3 980 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 NUP88Q99567 741 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 CRACR2AQ9BSW2 395 aa17.39■□□□□ 0.37
LIMS2-205ENST00000409455 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
LIMS2-205ENST00000409455 CUL4BQ13620 913 aa17.38■□□□□ 0.37
LIMS2-205ENST00000409455 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
LIMS2-205ENST00000409455 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
LIMS2-205ENST00000409455 TRIM14Q14142 442 aa17.38■□□□□ 0.37
LIMS2-205ENST00000409455 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-205ENST00000409455 SKIDA1Q1XH10 827 aa17.38■□□□□ 0.37
LIMS2-205ENST00000409455 MYL10Q9BUA6 226 aa17.38■□□□□ 0.37
LIMS2-205ENST00000409455 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIMS2-205ENST00000409455 SENP2Q9HC62 589 aa17.38■□□□□ 0.37
LIMS2-205ENST00000409455 AKAP11Q9UKA4 1901 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 B4E1Z4 1266 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 ERLIN2O94905 339 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-205ENST00000409455 CCT6AP40227 531 aaKnown RBP17.37■□□□□ 0.37
LIMS2-205ENST00000409455 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 TRAPPC11Q7Z392 1133 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 FAM76AQ8TAV0 307 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 SLF1Q9BQI6 1058 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 FOXP1Q9H334 677 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-205ENST00000409455 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 TARSL2A2RTX5 802 aaKnown RBP17.37■□□□□ 0.37
LIMS2-205ENST00000409455 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 SHOX2O60902 331 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-205ENST00000409455 APPP05067 770 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 CD44P16070 742 aaKnown RBP17.37■□□□□ 0.37
LIMS2-205ENST00000409455 TMEM67Q5HYA8 995 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 SGMS1Q86VZ5 419 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 CSRNP2Q9H175 543 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
LIMS2-205ENST00000409455 PCDHB6Q9Y5E3 794 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms