RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 POTEEQ6S8J3 1075 aa23.85■■□□□ 1.41
PTCD3-202ENST00000409326 CD99L2Q8TCZ2 262 aa23.85■■□□□ 1.41
PTCD3-202ENST00000409326 DOCK3Q8IZD9 2030 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 BMP3P12645 472 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 ANTXR2P58335 489 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 KRT32Q14532 448 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 USP26Q9BXU7 913 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 TXNRD2Q9NNW7 524 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 FBXO28Q9NVF7 368 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 RBPJLQ9UBG7 517 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 RABGAP1Q9Y3P9 1069 aa23.84■■□□□ 1.41
PTCD3-202ENST00000409326 EIF5BO60841 1220 aaKnown RBP23.83■■□□□ 1.41
PTCD3-202ENST00000409326 MCCP23508 829 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 KIF22Q14807 665 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 SART3Q15020 963 aaKnown RBP23.83■■□□□ 1.41
PTCD3-202ENST00000409326 IFIT1BQ5T764 474 aaKnown RBP23.83■■□□□ 1.41
PTCD3-202ENST00000409326 CHST3Q7LGC8 479 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 DCAF4Q8WV16 495 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 MTA3Q9BTC8 594 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 KAT14Q9H8E8 782 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 PPP1R9AQ9ULJ8 1098 aa23.83■■□□□ 1.41
PTCD3-202ENST00000409326 ERICH2A1L162 156 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 IFIT3O14879 490 aaKnown RBP23.82■■□□□ 1.4
PTCD3-202ENST00000409326 MCM5P33992 734 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 ERVK-9P63128 1117 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 ERVK-24P63145 666 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 CAP1Q01518 475 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 RASGRP2Q7LDG7 609 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 PNMA1Q8ND90 353 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 ATG4CQ96DT6 458 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 NEK1Q96PY6 1258 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 SLF1Q9BQI6 1058 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 PAGR1Q9BTK6 254 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 FEM1BQ9UK73 627 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 MTMR7Q9Y216 660 aa23.82■■□□□ 1.4
PTCD3-202ENST00000409326 PRC1O43663 620 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 CNMDO75829 334 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 PDHBP11177 359 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 COL9A3Q14050 684 aaPredicted RBP23.81■■□□□ 1.4
PTCD3-202ENST00000409326 ADCK5Q3MIX3 580 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 CTU1Q7Z7A3 348 aaKnown RBP23.81■■□□□ 1.4
PTCD3-202ENST00000409326 MB21D1Q8N884 522 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 GPRC5AQ8NFJ5 357 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 ARHGAP39Q9C0H5 1083 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 ADAMTS5Q9UNA0 930 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 SNX14Q9Y5W7 946 aa23.81■■□□□ 1.4
PTCD3-202ENST00000409326 PEX10O60683 326 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 SNHG28P0DPA3 235 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 CTGFP29279 349 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 STAT2P52630 851 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 WTAPQ15007 396 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 ARHGEF6Q15052 776 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 CCDC96Q2M329 555 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 C8orf34Q49A92 452 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 SAMD1Q6SPF0 538 aaPredicted RBP23.8■■□□□ 1.4
PTCD3-202ENST00000409326 KCTD1Q719H9 257 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 PRPF38AQ8NAV1 312 aaKnown RBP23.8■■□□□ 1.4
PTCD3-202ENST00000409326 IGDCC4Q8TDY8 1250 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 CHMP4CQ96CF2 233 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 BTBD7Q9P203 1132 aa23.8■■□□□ 1.4
PTCD3-202ENST00000409326 ISY1Q9ULR0 285 aaKnown RBP23.8■■□□□ 1.4
PTCD3-202ENST00000409326 TMEM232C9JQI7 657 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 PLA2G6O60733 806 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 PSMC4P43686 418 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 FCGRTP55899 365 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 Q3C1V9 767 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 TMEM67Q5HYA8 995 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 COL13A1Q5TAT6 717 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-202ENST00000409326 FAM160B2Q86V87 743 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 TMEM87BQ96K49 555 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 EFCC1Q9HA90 598 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 WDR19Q8NEZ3 1342 aa23.79■■□□□ 1.4
PTCD3-202ENST00000409326 VWA5AO00534 786 aa23.78■■□□□ 1.4
PTCD3-202ENST00000409326 OTOP1Q7RTM1 612 aa23.78■■□□□ 1.4
PTCD3-202ENST00000409326 CHURC1Q8WUH1 139 aa23.78■■□□□ 1.4
PTCD3-202ENST00000409326 KIFC2Q96AC6 838 aa23.78■■□□□ 1.4
PTCD3-202ENST00000409326 TRIM47Q96LD4 638 aa23.78■■□□□ 1.4
PTCD3-202ENST00000409326 TRIM17Q9Y577 477 aa23.78■■□□□ 1.4
PTCD3-202ENST00000409326 PLXNB2O15031 1838 aa23.77■■□□□ 1.4
PTCD3-202ENST00000409326 GNRH1P01148 92 aa23.77■■□□□ 1.4
PTCD3-202ENST00000409326 HMGB1P09429 215 aaKnown RBP23.77■■□□□ 1.4
PTCD3-202ENST00000409326 CCNA1P78396 465 aa23.77■■□□□ 1.4
PTCD3-202ENST00000409326 ZNF543Q08ER8 600 aa23.77■■□□□ 1.4
PTCD3-202ENST00000409326 DHX32Q7L7V1 743 aaKnown RBP23.77■■□□□ 1.4
PTCD3-202ENST00000409326 LY9Q9HBG7 655 aa23.77■■□□□ 1.4
PTCD3-202ENST00000409326 SENP2Q9HC62 589 aa23.77■■□□□ 1.4
PTCD3-202ENST00000409326 FRMPD2Q68DX3 1309 aaPredicted RBP23.77■■□□□ 1.4
PTCD3-202ENST00000409326 SH2B2O14492 632 aaPredicted RBP23.76■■□□□ 1.39
PTCD3-202ENST00000409326 ECM2O94769 699 aaPredicted RBP23.76■■□□□ 1.39
PTCD3-202ENST00000409326 FMNL1O95466 1100 aaPredicted RBP23.76■■□□□ 1.39
PTCD3-202ENST00000409326 IKQ13123 557 aaPredicted RBP23.76■■□□□ 1.39
PTCD3-202ENST00000409326 TMEM132BQ14DG7 1078 aa23.76■■□□□ 1.39
PTCD3-202ENST00000409326 GPATCH4Q5T3I0 446 aaKnown RBP23.76■■□□□ 1.39
PTCD3-202ENST00000409326 BTNL9Q6UXG8 535 aa23.76■■□□□ 1.39
PTCD3-202ENST00000409326 REPS2Q8NFH8 660 aa23.76■■□□□ 1.39
PTCD3-202ENST00000409326 JAKMIP1Q96N16 626 aaKnown RBP23.76■■□□□ 1.39
PTCD3-202ENST00000409326 SPATC1LQ9H0A9 340 aa23.76■■□□□ 1.39
PTCD3-202ENST00000409326 MYH6P13533 1939 aa23.76■■□□□ 1.39
PTCD3-202ENST00000409326 SEC24BO95487 1268 aa23.75■■□□□ 1.39
PTCD3-202ENST00000409326 FDX1P10109 184 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms