RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 LIFRP42702 1097 aa9.58□□□□□ -0.88
SH3D19-202ENST00000409252 SNAP25P60880 206 aa9.58□□□□□ -0.88
SH3D19-202ENST00000409252 SBK1Q52WX2 424 aa9.58□□□□□ -0.88
SH3D19-202ENST00000409252 MCTP2Q6DN12 878 aa9.58□□□□□ -0.88
SH3D19-202ENST00000409252 C15orf52Q6ZUT6 534 aaKnown RBP9.58□□□□□ -0.88
SH3D19-202ENST00000409252 NUP88Q99567 741 aaPredicted RBP9.58□□□□□ -0.88
SH3D19-202ENST00000409252 SYKP43405 635 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 PLCD1P51178 756 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 SCRN1Q12765 414 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 SNAPC2Q13487 334 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 KLHL10Q6JEL2 608 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 USP50Q70EL3 339 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 NEDD1Q8NHV4 660 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 BICD1Q96G01 975 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 AZI2Q9H6S1 392 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 FEM1BQ9UK73 627 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 VWA3AA6NCI4 1184 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 UBE2Q2LH0YL09 131 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 POTEB2H3BUK9 544 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 TXKP42681 527 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 NCAPH2Q6IBW4 605 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 CYB5R4Q7L1T6 521 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 PPP2R3BQ9Y5P8 575 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 OFD1O75665 1012 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 VIL1P09327 827 aaKnown RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 GBA2Q9HCG7 927 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 EPB41L4AQ9HCS5 686 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 GPRC5DQ9NZD1 345 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 ADD3Q9UEY8 706 aaKnown RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 WNT10BO00744 389 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 SYCP3Q8IZU3 236 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 ENAHQ8N8S7 591 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 ZNF280CQ8ND82 737 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 RNF26Q9BY78 433 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 GLIS2Q9BZE0 524 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-202ENST00000409252 MLXIPQ9HAP2 919 aa9.57□□□□□ -0.88
SH3D19-202ENST00000409252 F5H6K3 240 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 KLRC3Q07444 240 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 RRAGBQ5VZM2 374 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 MRPS27Q92552 414 aaKnown RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 RPAP3Q9H6T3 665 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 ADM5C9JUS6 153 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 CCT6AP40227 531 aaKnown RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 TAF1CQ15572 869 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 HAUS3Q68CZ6 603 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 C16orf86Q6ZW13 317 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 SMARCE1Q969G3 411 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 DHX58Q96C10 678 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 DDX19AQ9NUU7 478 aaKnown RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 EXOC1Q9NV70 894 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 SORBS3O60504 671 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 CTNND1O60716 968 aaKnown RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 AFMP43652 599 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 CALCRLQ16602 461 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 GALNT17Q6IS24 598 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 COA7Q96BR5 231 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 PLIN2Q99541 437 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 ABCA3Q99758 1704 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 SERPINC1P01008 464 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 UBXN2AP68543 259 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 RCSD1Q6JBY9 416 aa9.56□□□□□ -0.88
SH3D19-202ENST00000409252 MB21D2Q8IYB1 491 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 AFDNP55196 1824 aaKnown RBP9.56□□□□□ -0.88
SH3D19-202ENST00000409252 hCG_1984214I3L0E3 225 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 DKC1O60832 514 aaKnown RBP eCLIP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 FOSP01100 380 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 PRR16Q569H4 304 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 NBPF12Q5TAG4 269 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 SNRNP48Q6IEG0 339 aaKnown RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 CCDC84Q86UT8 332 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 CLEC10AQ8IUN9 316 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 SCYL3Q8IZE3 742 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 ZNF713Q8N859 430 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 KRI1Q8N9T8 703 aaKnown RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 RAVER2Q9HCJ3 691 aaKnown RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 CCL15-CCL14A0A0B4J2E2 113 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 GAS7O60861 476 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 ASIC1P78348 528 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 CCL15Q16663 113 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 ZKSCAN4Q969J2 545 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-202ENST00000409252 SOCS7O14512 581 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 FAM13AO94988 1023 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 PLEKHA8P1O95397 391 aa9.55□□□□□ -0.88
SH3D19-202ENST00000409252 UBE2HP62256 183 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms