RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 CDC25AP30304 524 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 RBL2Q08999 1139 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 IRX2Q9BZI1 471 aaPredicted RBP18.8■□□□□ 0.6
COL23A1-202ENST00000407622 EPC1Q9H2F5 836 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 ST7Q9NRC1 585 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 FAM205AQ6ZU69 1335 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 LY75O60449 1722 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 TSPY2A6NKD2 308 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 SEMA3EO15041 775 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 GNPATO15228 680 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 BMP15O95972 392 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 PBX1P40424 430 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 PFKFB3Q16875 520 aaPredicted RBP18.79■□□□□ 0.6
COL23A1-202ENST00000407622 GPKOWQ92917 476 aaPredicted RBP eCLIP18.79■□□□□ 0.6
COL23A1-202ENST00000407622 AKR1B15C9JRZ8 316 aaPredicted RBP18.79■□□□□ 0.6
COL23A1-202ENST00000407622 TRIM37O94972 964 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 PDXDC2PQ6P474 469 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 KRT222Q8N1A0 295 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 IGSF22Q8N9C0 903 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 RASGRP4Q8TDF6 673 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 KIFC2Q96AC6 838 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 LRRC4BQ9NT99 713 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 ATP8A2Q9NTI2 1148 aa18.79■□□□□ 0.6
COL23A1-202ENST00000407622 RAD9BQ6WBX8 426 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 NBPF5PQ86XG9 351 aaPredicted RBP18.78■□□□□ 0.6
COL23A1-202ENST00000407622 UBXN4Q92575 508 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 DYNLL2Q96FJ2 89 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 IL17RBQ9NRM6 502 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 CCDC88AQ3V6T2 1871 aa18.78■□□□□ 0.6
COL23A1-202ENST00000407622 CASQ1P31415 396 aa18.77■□□□□ 0.6
COL23A1-202ENST00000407622 CCT6AP40227 531 aaKnown RBP18.77■□□□□ 0.6
COL23A1-202ENST00000407622 TYW1BQ6NUM6 668 aa18.77■□□□□ 0.6
COL23A1-202ENST00000407622 NLRP3Q96P20 1036 aa18.77■□□□□ 0.6
COL23A1-202ENST00000407622 ARPP21Q9UBL0 812 aaPredicted RBP18.77■□□□□ 0.6
COL23A1-202ENST00000407622 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.6
COL23A1-202ENST00000407622 SLC35G1Q2M3R5 365 aa18.77■□□□□ 0.59
COL23A1-202ENST00000407622 SBK1Q52WX2 424 aa18.77■□□□□ 0.59
COL23A1-202ENST00000407622 PANX2Q96RD6 677 aa18.77■□□□□ 0.59
COL23A1-202ENST00000407622 FHOD1Q9Y613 1164 aa18.77■□□□□ 0.59
COL23A1-202ENST00000407622 MAP3K9P80192 1104 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 C4orf32Q8N8J7 132 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 IQUBQ8NA54 791 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 SETDB2Q96T68 719 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 PDS5AQ29RF7 1337 aaKnown RBP18.76■□□□□ 0.59
COL23A1-202ENST00000407622 IRS2Q9Y4H2 1338 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 MAST2Q6P0Q8 1798 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 MYH8P13535 1937 aa18.76■□□□□ 0.59
COL23A1-202ENST00000407622 RGL2O15211 777 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 GYPCP04921 128 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 RXRBP28702 533 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 TM4SF1P30408 202 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 CASP14P31944 242 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL23A1-202ENST00000407622 TFAP4Q01664 338 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 GRIK5Q16478 980 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 CT47A1Q5JQC4 288 aaPredicted RBP18.75■□□□□ 0.59
COL23A1-202ENST00000407622 RRAGBQ5VZM2 374 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 LZTFL1Q9NQ48 299 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 NARFQ9UHQ1 456 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 MRFAP1Q9Y605 127 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 GOLGA6L9A6NEM1 432 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 KRT31Q15323 416 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 PPFIBP1Q86W92 1011 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 SRRTQ9BXP5 876 aaKnown RBP18.75■□□□□ 0.59
COL23A1-202ENST00000407622 MAPK8IP1Q9UQF2 711 aa18.75■□□□□ 0.59
COL23A1-202ENST00000407622 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 EFCAB8A8MWE9 144 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 RNF225M0QZC1 329 aaPredicted RBP18.74■□□□□ 0.59
COL23A1-202ENST00000407622 MFAP3LO75121 409 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 TRAPPC10P48553 1259 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 DZIP1Q86YF9 867 aaKnown RBP18.74■□□□□ 0.59
COL23A1-202ENST00000407622 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
COL23A1-202ENST00000407622 KAT14Q9H8E8 782 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
COL23A1-202ENST00000407622 MTMR7Q9Y216 660 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 GDAQ9Y2T3 454 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 ADGRG1Q9Y653 693 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 SLC44A5Q8NCS7 719 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 SH3RF3Q8TEJ3 882 aaPredicted RBP18.74■□□□□ 0.59
COL23A1-202ENST00000407622 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
COL23A1-202ENST00000407622 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
COL23A1-202ENST00000407622 TAF1LQ8IZX4 1826 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 PP2D1A8MPX8 630 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 GTPBP6O43824 516 aaPredicted RBP18.73■□□□□ 0.59
COL23A1-202ENST00000407622 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
COL23A1-202ENST00000407622 CCDC175P0C221 793 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 DIXDC1Q155Q3 683 aa18.73■□□□□ 0.59
COL23A1-202ENST00000407622 C12orf60Q5U649 245 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms