RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.82□□□□□ -0.84
GPC3-203ENST00000406757 CNNM2Q9H8M5 875 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 IL17RBQ9NRM6 502 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 SWAP70Q9UH65 585 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 NAP1L2Q9ULW6 460 aaPredicted RBP9.82□□□□□ -0.84
GPC3-203ENST00000406757 RBBP6Q7Z6E9 1792 aaKnown RBP9.82□□□□□ -0.84
GPC3-203ENST00000406757 COL2A1P02458 1487 aaPredicted RBP9.81□□□□□ -0.84
GPC3-203ENST00000406757 PHF20L1A8MW92 1017 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 GH2P01242 217 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 GUCY1A2P33402 732 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 LACTBP83111 547 aaPredicted RBP9.81□□□□□ -0.84
GPC3-203ENST00000406757 ATP2B2Q01814 1243 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 APOBRQ0VD83 1088 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 SNAPC2Q13487 334 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 SEPT2Q15019 361 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 RAB3GAP1Q15042 981 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 ABCB5Q2M3G0 1257 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 TMEM67Q5HYA8 995 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 IGDCC4Q8TDY8 1250 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 BRF1Q92994 677 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 ZSCAN10Q96SZ4 725 aaPredicted RBP9.81□□□□□ -0.84
GPC3-203ENST00000406757 ZNF341Q9BYN7 854 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 HERC5Q9UII4 1024 aaKnown RBP9.81□□□□□ -0.84
GPC3-203ENST00000406757 MTMR7Q9Y216 660 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 ZSWIM8A7E2V4 1837 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 TNKSO95271 1327 aa9.81□□□□□ -0.84
GPC3-203ENST00000406757 SH2B2O14492 632 aaPredicted RBP9.8□□□□□ -0.84
GPC3-203ENST00000406757 TBC1D12O60347 775 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 LARGE1O95461 756 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 HMGB1P09429 215 aaKnown RBP9.8□□□□□ -0.84
GPC3-203ENST00000406757 CHRM1P11229 460 aaPredicted RBP9.8□□□□□ -0.84
GPC3-203ENST00000406757 RXRAP19793 462 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 STK3Q13188 491 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 PPIL2Q13356 520 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 KIF22Q14807 665 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 DCAF15Q66K64 600 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 NFXL1Q6ZNB6 911 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 SPRYD3Q8NCJ5 442 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 HOOK2Q96ED9 719 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 CEP95Q96GE4 821 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 UBAC1Q9BSL1 405 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 MYL10Q9BUA6 226 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 ZNF287Q9HBT7 754 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 ZCCHC17Q9NP64 241 aaKnown RBP9.8□□□□□ -0.84
GPC3-203ENST00000406757 CPA4Q9UI42 421 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 BRPF3Q9ULD4 1205 aa9.8□□□□□ -0.84
GPC3-203ENST00000406757 PCP11498 1178 aaKnown RBP9.79□□□□□ -0.84
GPC3-203ENST00000406757 CTGFP29279 349 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 CAP2P40123 477 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 PPATQ06203 517 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 WTAPQ15007 396 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 SEC23AQ15436 765 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 RCSD1Q6JBY9 416 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 IQCA1Q86XH1 822 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 CCDC144CPQ8IYA2 1237 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 ENAHQ8N8S7 591 aaPredicted RBP9.79□□□□□ -0.84
GPC3-203ENST00000406757 NECAB1Q8N987 351 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 MARVELD3Q96A59 401 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 LY9Q9HBG7 655 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 CABP5Q9NP86 173 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 CLIP2Q9UDT6 1046 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
GPC3-203ENST00000406757 MYH8P13535 1937 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 IGKV6D-41A0A0C4DH26 115 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 KLF18A0A0U1RQI7 1052 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 ERICH2A1L162 156 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 PDHXO00330 501 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 RAD21O60216 631 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 PPFIA3O75145 1194 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 EEF2P13639 858 aaKnown RBP9.78□□□□□ -0.84
GPC3-203ENST00000406757 PSMC4P43686 418 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 FXR1P51114 621 aaKnown RBP eCLIP9.78□□□□□ -0.84
GPC3-203ENST00000406757 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
GPC3-203ENST00000406757 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 IFIT1BQ5T764 474 aaKnown RBP9.78□□□□□ -0.84
GPC3-203ENST00000406757 C17orf99Q6UX52 265 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 RASGRP2Q7LDG7 609 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 SIAH1Q8IUQ4 282 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 LRRC47Q8N1G4 583 aaKnown RBP9.78□□□□□ -0.84
GPC3-203ENST00000406757 ACER1Q8TDN7 264 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 NUP133Q8WUM0 1156 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 CCDC17Q96LX7 622 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 TMEM47Q9BQJ4 181 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 ZNF112Q9UJU3 913 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 ZBTB21Q9ULJ3 1066 aa9.78□□□□□ -0.84
GPC3-203ENST00000406757 A0A1W2PRG0 241 aa9.77□□□□□ -0.85
GPC3-203ENST00000406757 CCDC69A6NI79 296 aa9.77□□□□□ -0.85
GPC3-203ENST00000406757 CTNND1O60716 968 aaKnown RBP9.77□□□□□ -0.85
GPC3-203ENST00000406757 GNRH1P01148 92 aa9.77□□□□□ -0.85
GPC3-203ENST00000406757 ANP32AP39687 249 aaKnown RBP9.77□□□□□ -0.85
GPC3-203ENST00000406757 SART3Q15020 963 aaKnown RBP9.77□□□□□ -0.85
GPC3-203ENST00000406757 MTFR1Q15390 333 aa9.77□□□□□ -0.85
GPC3-203ENST00000406757 ZYXQ15942 572 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms