RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 AOPEPQ8N6M6 819 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 IGKV6D-41A0A0C4DH26 115 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 POLR2DO15514 142 aaKnown RBP28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 PNOCQ13519 176 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 RRP36Q96EU6 259 aaKnown RBP28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 BPIFA3Q9BQP9 254 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 SCN9AQ15858 1988 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 MYH8P13535 1937 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 USP17L5A8MUK1 530 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 STXBP3O00186 592 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 WNT7AO00755 349 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 PPIP5K2O43314 1243 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 SHMT1P34896 483 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 RASGRP2Q7LDG7 609 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 METTL16Q86W50 562 aaKnown RBP28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 PLA2G4DQ86XP0 818 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 SPC24Q8NBT2 197 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 PDGFDQ9GZP0 370 aaPredicted RBP28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 SERPINA10Q9UK55 444 aa28.18■■■□□ 2.1
DNMT3A-206ENST00000406659 ADAMTS3O15072 1205 aa28.17■■■□□ 2.1
DNMT3A-206ENST00000406659 TPM3P06753 285 aa28.17■■■□□ 2.1
DNMT3A-206ENST00000406659 GRIPAP1Q4V328 841 aa28.17■■■□□ 2.1
DNMT3A-206ENST00000406659 DAGLBQ8NCG7 672 aa28.17■■■□□ 2.1
DNMT3A-206ENST00000406659 EHD4Q9H223 541 aa28.17■■■□□ 2.1
DNMT3A-206ENST00000406659 DHX36Q9H2U1 1008 aaKnown RBP28.17■■■□□ 2.1
DNMT3A-206ENST00000406659 ATP2C1P98194 919 aaPredicted RBP28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 PTGDRQ13258 359 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 TYW1BQ6NUM6 668 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 SARM1Q6SZW1 724 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 TTLL6Q8N841 843 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 CCDC12Q8WUD4 166 aaPredicted RBP28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 CPVLQ9H3G5 476 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 CLIP2Q9UDT6 1046 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 SEC63Q9UGP8 760 aaKnown RBP28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 PCDHAC2Q9Y5I4 1007 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 TTLL1O95922 423 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 KANK3Q6NY19 840 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 DEFB132Q7Z7B7 95 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 ZFPM1Q8IX07 1006 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 DRC7Q8IY82 874 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 SERTAD1Q9UHV2 236 aa28.16■■■□□ 2.1
DNMT3A-206ENST00000406659 CCDC194A0A1B0GVG4 234 aa28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 ZNF500O60304 480 aaPredicted RBP28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 TCP10Q12799 353 aa28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 LRRC47Q8N1G4 583 aaKnown RBP28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 CCDC17Q96LX7 622 aa28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 IDI2Q9BXS1 227 aa28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 VAT1LQ9HCJ6 419 aa28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 C10orf71Q711Q0 1435 aa28.15■■■□□ 2.1
DNMT3A-206ENST00000406659 MPHOSPH10O00566 681 aaKnown RBP28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 PDHBP11177 359 aa28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 MCM7P33993 719 aa28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 CACNB3P54284 484 aa28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 EIF6P56537 245 aaKnown RBP28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 MDM2Q00987 491 aaPredicted RBP28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 ASPRV1Q53RT3 343 aa28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 ISM2Q6H9L7 571 aa28.14■■■□□ 2.1
DNMT3A-206ENST00000406659 NAPAP54920 295 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 CCDC93Q567U6 631 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 PPP4R3BQ5MIZ7 849 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 USP49Q70CQ1 688 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 HOMER1Q86YM7 354 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 PDILTQ8N807 584 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 RASGRP4Q8TDF6 673 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 ZNF830Q96NB3 372 aaPredicted RBP28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 PCDHA6Q9UN73 950 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 PCDHA8Q9Y5H6 950 aa28.14■■■□□ 2.09
DNMT3A-206ENST00000406659 M0R2N6 131 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 POSTNQ15063 836 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 RTKN2Q8IZC4 609 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 CCDC34Q96HJ3 373 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 UBA5Q9GZZ9 404 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 FAM198AQ9UFP1 575 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 PCDHA5Q9Y5H7 936 aa28.13■■■□□ 2.09
DNMT3A-206ENST00000406659 ZNF646O15015 1829 aaPredicted RBP28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 SMTNL1A8MU46 457 aa28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 TPM4P67936 248 aa28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 ZSCAN29Q8IWY8 852 aaPredicted RBP28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 RIOX1Q9H6W3 641 aa28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 PI4KBQ9UBF8 816 aa28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 FRMPD2Q68DX3 1309 aaPredicted RBP28.12■■■□□ 2.09
DNMT3A-206ENST00000406659 VWA3AA6NCI4 1184 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 NPM3O75607 178 aaKnown RBP28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 SOGA3Q5TF21 947 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 CLEC10AQ8IUN9 316 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 SLC16A10Q8TF71 515 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 SYMPKQ92797 1274 aaKnown RBP28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 EPSTI1Q96J88 318 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 PIGSQ96S52 555 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 TRIM34Q9BYJ4 488 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 TTC12Q9H892 705 aaPredicted RBP28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 C6orf50Q9HD87 102 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 YDJCA8MPS7 323 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 FOXN1O15353 648 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 ACTN4O43707 911 aaKnown RBP28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 CDC25BP30305 580 aa28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 FOXP4Q8IVH2 680 aaPredicted RBP28.11■■■□□ 2.09
DNMT3A-206ENST00000406659 ZMYND12Q9H0C1 365 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms