RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C9IYK1 514 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 CBFA2T2O43439 604 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 SPATA31C1P0DKV0 1188 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 RAB6AP20340 208 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 SOX5P35711 763 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 AUHQ13825 339 aaKnown RBP6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 LETMD1Q6P1Q0 360 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 ZNF227Q86WZ6 799 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 GIMAP7Q8NHV1 300 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 RCC1LQ96I51 464 aaKnown RBP6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 KREMEN1Q96MU8 473 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 ACSS3Q9H6R3 686 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 ARHGEF4Q9NR80 690 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 SUSD2Q9UGT4 822 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 USP21Q9UK80 565 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
HMGB3P18-201ENST00000406327 C9orf172C9J069 976 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 ITGAVP06756 1048 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 GLB1P16278 677 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 CD247P20963 164 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 CNGA1P29973 690 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 PPP2R2AP63151 447 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 PABPC4Q13310 644 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 NOL9Q5SY16 702 aaKnown RBP6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 Q6ZS46 218 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 DNAJB8Q8NHS0 232 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 KISS1RQ969F8 398 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 LENG1Q96BZ8 264 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 FBXL18Q96ME1 805 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 MIPEPQ99797 713 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 INTS7Q9NVH2 962 aaKnown RBP6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 DAGLAQ9Y4D2 1042 aa6.6□□□□□ -1.35
HMGB3P18-201ENST00000406327 APBA3O96018 575 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 GATA4P43694 442 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 PREPP48147 710 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 NBPF9Q3BBW0 867 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 DCAF15Q66K64 600 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 NSMFQ6X4W1 530 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 UBE3DQ7Z6J8 389 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 PPP1R13LQ8WUF5 828 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 ZNF512BQ96KM6 892 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 FGD4Q96M96 766 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 CCDC140Q96MF4 163 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 CAAP1Q9H8G2 361 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 GP6Q9HCN6 339 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 PRDM10Q9NQV6 1147 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 FBXL21Q9UKT6 434 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 AKT3Q9Y243 479 aa6.59□□□□□ -1.35
HMGB3P18-201ENST00000406327 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 EFCAB14O75071 495 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 PABPC1P11940 636 aaKnown RBP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 MYCLP1P12525 358 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 CPEP16870 476 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 L1CAMP32004 1257 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 AMPD3Q01432 767 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 GRB10Q13322 594 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 TRIM59Q8IWR1 403 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 AGGF1Q8N302 714 aaeCLIP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 EXOC2Q96KP1 924 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 ZFP64Q9NPA5 681 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 APEX2Q9UBZ4 518 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 MCM8Q9UJA3 840 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 KCNH3Q9ULD8 1083 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 MAPRE3Q9UPY8 281 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 DIS3Q9Y2L1 958 aaKnown RBP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 SF3B6Q9Y3B4 125 aaKnown RBP6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 EMC9Q9Y3B6 208 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 ZNF451Q9Y4E5 1061 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 FHOD1Q9Y613 1164 aa6.58□□□□□ -1.36
HMGB3P18-201ENST00000406327 IRS4O14654 1257 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 PRODHO43272 600 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 STAT3P40763 770 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 FAM209AQ5JX71 171 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 ARTNQ5T4W7 220 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 DHX37Q8IY37 1157 aaKnown RBP6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 ARHGEF39Q8N4T4 335 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 SYTL5Q8TDW5 730 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 KCTD13Q8WZ19 329 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 CEP89Q96ST8 783 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 ASCC2Q9H1I8 757 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 SEMA6CQ9H3T2 930 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 DDX56Q9NY93 547 aaKnown RBP6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 SFMBT1Q9UHJ3 866 aa6.57□□□□□ -1.36
HMGB3P18-201ENST00000406327 PDE8AO60658 829 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 RXRBP28702 533 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 GABREP78334 506 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 RSPO4Q2I0M5 234 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 FOXB2Q5VYV0 432 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 WWC2Q6AWC2 1192 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 PAOXQ6QHF9 649 aa6.56□□□□□ -1.36
HMGB3P18-201ENST00000406327 NBPF11Q86T75 865 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms