RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
MSH2-202ENST00000406134 GSDMAQ96QA5 445 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 BLZF1Q9H2G9 400 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 ADGRG1Q9Y653 693 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 SIPA1L1O43166 1804 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 ATAD5Q96QE3 1844 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 MFAP3LO75121 409 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 GABPB1Q06547 395 aaPredicted RBP11.2□□□□□ -0.62
MSH2-202ENST00000406134 KANK3Q6NY19 840 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 TFCP2L1Q9NZI6 479 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 ITIH6Q6UXX5 1313 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 CDC25AP30304 524 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
MSH2-202ENST00000406134 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
MSH2-202ENST00000406134 EFCAB8A8MWE9 144 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
MSH2-202ENST00000406134 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 SCG2P13521 617 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 PMS1P54277 932 aaKnown RBP11.19□□□□□ -0.62
MSH2-202ENST00000406134 KRT222Q8N1A0 295 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 LIMA1Q9UHB6 759 aaKnown RBP11.19□□□□□ -0.62
MSH2-202ENST00000406134 SEMA3EO15041 775 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSH2-202ENST00000406134 KLRC4O43908 158 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 TBC1D8O95759 1140 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 PIK3AP1Q6ZUJ8 805 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
MSH2-202ENST00000406134 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 FLT1P17948 1338 aa11.19□□□□□ -0.62
MSH2-202ENST00000406134 CCP110O43303 1012 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 KRT31Q15323 416 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 ANKS1AQ92625 1134 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 HOOK1Q9UJC3 728 aaKnown RBP11.18□□□□□ -0.62
MSH2-202ENST00000406134 REXO2Q9Y3B8 237 aaKnown RBP11.18□□□□□ -0.62
MSH2-202ENST00000406134 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
MSH2-202ENST00000406134 ANKRD31Q8N7Z5 1873 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 DACH1Q9UI36 760 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 JAG2Q9Y219 1238 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 AKR1B15C9JRZ8 316 aaPredicted RBP11.18□□□□□ -0.62
MSH2-202ENST00000406134 ZSCAN12O43309 604 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 URI1O94763 535 aaPredicted RBP11.18□□□□□ -0.62
MSH2-202ENST00000406134 CALM1P0DP23 149 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 CALM2P0DP24 149 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 CALM3P0DP25 149 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 CASP14P31944 242 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 KLHL10Q6JEL2 608 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 FAM177A1Q8N128 213 aaPredicted RBP11.18□□□□□ -0.62
MSH2-202ENST00000406134 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
MSH2-202ENST00000406134 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 NRXN2Q9P2S2 1712 aa11.18□□□□□ -0.62
MSH2-202ENST00000406134 PP2D1A8MPX8 630 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 RGL2O15211 777 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 IGSF22Q8N9C0 903 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 EDIL3O43854 480 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 SLC4A8Q2Y0W8 1093 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 IQCA1Q86XH1 822 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 ATP8A2Q9NTI2 1148 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 ANKZF1Q9H8Y5 726 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 ZNF652Q9Y2D9 606 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
MSH2-202ENST00000406134 MCM7P33993 719 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 PRCPP42785 496 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 GNG11P61952 73 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 GNL3LQ9NVN8 582 aaKnown RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 KIF20AO95235 890 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 CC2D1AQ6P1N0 951 aaPredicted RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 ACRBPQ8NEB7 543 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 SRRTQ9BXP5 876 aaKnown RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 ABHD10Q9NUJ1 306 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 STXBP3O00186 592 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 CCT6AP40227 531 aaKnown RBP11.16□□□□□ -0.62
MSH2-202ENST00000406134 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 GRM4Q14833 912 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 ZNF507Q8TCN5 953 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 NARFQ9UHQ1 456 aa11.16□□□□□ -0.62
MSH2-202ENST00000406134 USP17L3A6NCW0 530 aa11.15□□□□□ -0.62
MSH2-202ENST00000406134 USP17L4A6NCW7 530 aa11.15□□□□□ -0.62
MSH2-202ENST00000406134 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms