RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 STMN4Q9H169 189 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 SLC24A3Q9HC58 644 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 HPCAL4Q9UM19 191 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 SRPRBQ9Y5M8 271 aaKnown RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 YEATS2Q9ULM3 1422 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 ZNF532Q9HCE3 1301 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 HGSO14964 777 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 SEMA3EO15041 775 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 CALM1P0DP23 149 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 CALM2P0DP24 149 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 CALM3P0DP25 149 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 CDC25AP30304 524 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 AP1ARQ63HQ0 302 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 TCP11Q8WWU5 503 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 TRIM6Q9C030 488 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 ARMT1Q9H993 441 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 ACTR5Q9H9F9 607 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 MKNK2Q9HBH9 465 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 SEC63Q9UGP8 760 aaKnown RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 IQSEC3Q9UPP2 1182 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 METP08581 1390 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 MROH7-TTC4A0A0A0MT08 1334 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 A0A1B0GTH6 734 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 LRRIQ3A6PVS8 624 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 B4DLN1 442 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 EIF3HO15372 352 aaKnown RBP eCLIP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 STARD3NLO95772 234 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 RPN1P04843 607 aaKnown RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 KRT13P13646 458 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 FDPSP14324 419 aaKnown RBP8.21□□□□□ -1.09
HDAC9-202ENST00000405010 GNAT2P19087 354 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 USP5P45974 858 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 PTGDRQ13258 359 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 AKNAD1Q5T1N1 836 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 LMBR1Q8WVP7 490 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 MMS19Q96T76 1030 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 NLRC4Q9NPP4 1024 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 STIM2Q9P246 746 aa8.21□□□□□ -1.09
HDAC9-202ENST00000405010 MEFVO15553 781 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-202ENST00000405010 MMP1P03956 469 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 ATP1A1P05023 1023 aaKnown RBP8.21□□□□□ -1.1
HDAC9-202ENST00000405010 PCK1P35558 622 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 PPP1R2P41236 205 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 FXR1P51114 621 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDAC9-202ENST00000405010 ATP11AP98196 1134 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 MTMR3Q13615 1198 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 UBE4AQ14139 1066 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 RPS6KA1Q15418 735 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 HIBCHQ6NVY1 386 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-202ENST00000405010 CCDC63Q8NA47 563 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 SIRT1Q96EB6 747 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 FAM212AQ96EL1 285 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 TUBGCP2Q9BSJ2 902 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 ANKZF1Q9H8Y5 726 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 SPATS2LQ9NUQ6 558 aaKnown RBP8.21□□□□□ -1.1
HDAC9-202ENST00000405010 MAP2K7O14733 419 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 TRHP20396 242 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-202ENST00000405010 NR1I3Q14994 352 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 HEATR3Q7Z4Q2 680 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 HOOK3Q86VS8 718 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 FANCBQ8NB91 859 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 PAGE5Q96GU1 130 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 KRT12Q99456 494 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 LRWD1Q9UFC0 647 aa8.21□□□□□ -1.1
HDAC9-202ENST00000405010 NRXN1Q9ULB1 1477 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 ADGRB1O14514 1584 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 TARSL2A2RTX5 802 aaKnown RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 POLD4Q9HCU8 107 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 KLC4Q9NSK0 619 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 RASAL2Q9UJF2 1139 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 INO80Q9ULG1 1556 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 USP6P35125 1406 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 SH2B2O14492 632 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 IGKV5-2P06315 115 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 IFNAR1P17181 557 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 EEF1GP26641 437 aaKnown RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 TCP11X2Q5H9J9 407 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 FAM89AQ96GI7 184 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 RAB21Q9UL25 225 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 NFU1Q9UMS0 254 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 ZNF609O15014 1411 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 ANO9A1A5B4 782 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 TRAF5O00463 557 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 PRDM1O75626 825 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 ELF1P32519 619 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 SSR1P43307 286 aaKnown RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 ZBED6P86452 979 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 CCDC25Q86WR0 208 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 CCDC170Q8IYT3 715 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 CHP1Q99653 195 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 PAIP2Q9BPZ3 127 aaKnown RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-202ENST00000405010 KCNK9Q9NPC2 374 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 RWDD2AQ9UIY3 292 aa8.2□□□□□ -1.1
HDAC9-202ENST00000405010 TNRQ92752 1358 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms