RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 FAM198AQ9UFP1 575 aa13.55□□□□□ -0.24
SMS-202ENST00000404933 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
SMS-202ENST00000404933 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
SMS-202ENST00000404933 SIPA1L1O43166 1804 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 PTMAP06454 111 aaKnown RBP13.54□□□□□ -0.24
SMS-202ENST00000404933 GOLGA8HP0CJ92 632 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMS-202ENST00000404933 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 RSBN1LQ6PCB5 846 aaPredicted RBP13.54□□□□□ -0.24
SMS-202ENST00000404933 USP17L2Q6R6M4 530 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 BLIDQ8IZY5 108 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 BARHL2Q9NY43 387 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 PCDHAC2Q9Y5I4 1007 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
SMS-202ENST00000404933 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 POLD1P28340 1107 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 ZNF165P49910 485 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 CACNB3P54284 484 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 TCP10Q12799 353 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 EARS2Q5JPH6 523 aaKnown RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 DAGLBQ8NCG7 672 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 CCDC12Q8WUD4 166 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 GPKOWQ92917 476 aaPredicted RBP eCLIP13.53□□□□□ -0.24
SMS-202ENST00000404933 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 PIM2Q9P1W9 311 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 KIAA1468Q9P260 1216 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 USP17L5A8MUK1 530 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 STXBP3O00186 592 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 ENTPD3O75355 529 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 VIL1P09327 827 aaKnown RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 PDHBP11177 359 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 ZRSR1Q15695 479 aaKnown RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 FOXP4Q8IVH2 680 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 SEC63Q9UGP8 760 aaKnown RBP13.53□□□□□ -0.24
SMS-202ENST00000404933 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 KCNH3Q9ULD8 1083 aa13.53□□□□□ -0.24
SMS-202ENST00000404933 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
SMS-202ENST00000404933 SNHG28P0DPA3 235 aa13.52□□□□□ -0.25
SMS-202ENST00000404933 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
SMS-202ENST00000404933 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
SMS-202ENST00000404933 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
SMS-202ENST00000404933 TDRD3Q9H7E2 651 aaKnown RBP13.52□□□□□ -0.25
SMS-202ENST00000404933 SPTLC3Q9NUV7 552 aa13.52□□□□□ -0.25
SMS-202ENST00000404933 TMOD2Q9NZR1 351 aa13.52□□□□□ -0.25
SMS-202ENST00000404933 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 hCG_1984214I3L0E3 225 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 PSMD14O00487 310 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 ZBTB7AO95365 584 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 ADCY5O95622 1261 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 CERKLQ49MI3 558 aaPredicted RBP13.51□□□□□ -0.25
SMS-202ENST00000404933 SH3BP5LQ7L8J4 393 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 LUZP1Q86V48 1076 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 ELOA2Q8IYF1 753 aaPredicted RBP13.51□□□□□ -0.25
SMS-202ENST00000404933 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
SMS-202ENST00000404933 PRMT6Q96LA8 375 aaPredicted RBP13.51□□□□□ -0.25
SMS-202ENST00000404933 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 NAT10Q9H0A0 1025 aaKnown RBP13.51□□□□□ -0.25
SMS-202ENST00000404933 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
SMS-202ENST00000404933 RAD17O75943 681 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
SMS-202ENST00000404933 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 RASGRP2Q7LDG7 609 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
SMS-202ENST00000404933 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 GMLQ99445 158 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
SMS-202ENST00000404933 ZNRF3Q9ULT6 936 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMS-202ENST00000404933 CCDC194A0A1B0GVG4 234 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 M0R2N6 131 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 NAPAP54920 295 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
SMS-202ENST00000404933 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
SMS-202ENST00000404933 ZNF174Q15697 407 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms