RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SH3RF3Q8TEJ3 882 aaPredicted RBP11.44□□□□□ -0.58
NUP43-204ENST00000403890 FEZ1Q99689 392 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 CHD9Q3L8U1 2897 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 GPR37L1O60883 481 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 COBLO75128 1261 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 RARBP10826 455 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 KCNQ1P51787 676 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 USP14P54578 494 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 MFSD5Q6N075 450 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 TBC1D9Q6ZT07 1266 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 C16orf59Q7L2K0 433 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 SNX27Q96L92 541 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 NOL10Q9BSC4 688 aaKnown RBP11.43□□□□□ -0.58
NUP43-204ENST00000403890 SLC28A3Q9HAS3 691 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 RAI14Q9P0K7 980 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 PCDHGA4Q9Y5G9 962 aa11.43□□□□□ -0.58
NUP43-204ENST00000403890 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
NUP43-204ENST00000403890 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 SPDYE16A6NNV3 312 aaPredicted RBP11.42□□□□□ -0.58
NUP43-204ENST00000403890 BAG3O95817 575 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 PGK1P00558 417 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 GH2P01242 217 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 VCAM1P19320 739 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 MVPQ14764 893 aaKnown RBP11.42□□□□□ -0.58
NUP43-204ENST00000403890 TGFBRAP1Q8WUH2 860 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 HERVK_113Q902F9 699 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 MOV10L1Q9BXT6 1211 aaKnown RBP11.42□□□□□ -0.58
NUP43-204ENST00000403890 KIAA1683Q9H0B3 1180 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 HOXC10Q9NYD6 342 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 HMG20BQ9P0W2 317 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
NUP43-204ENST00000403890 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
NUP43-204ENST00000403890 PLXNA1Q9UIW2 1896 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 ERC2O15083 957 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 ERCC3P19447 782 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
NUP43-204ENST00000403890 ATF7IPQ6VMQ6 1270 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 ZNF365Q70YC5 407 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 MAPKAPK5Q8IW41 473 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 MICALL1Q8N3F8 863 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 SPATA5Q8NB90 893 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 SHCBP1Q8NEM2 672 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
NUP43-204ENST00000403890 NKX2-4Q9H2Z4 354 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 NRBP1Q9UHY1 535 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 TBX21Q9UL17 535 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 SMCHD1A6NHR9 2005 aa11.41□□□□□ -0.58
NUP43-204ENST00000403890 A0A1B0GUL7 405 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 CSF2RAP15509 400 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 COG2Q14746 738 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 PSRC1Q6PGN9 363 aaPredicted RBP11.4□□□□□ -0.58
NUP43-204ENST00000403890 ABRAQ8N0Z2 381 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 MAML3Q96JK9 1138 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 SPATC1LQ9H0A9 340 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.58
NUP43-204ENST00000403890 RPAP3Q9H6T3 665 aaPredicted RBP11.4□□□□□ -0.58
NUP43-204ENST00000403890 STARD7Q9NQZ5 370 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 AATFQ9NY61 560 aaKnown RBP eCLIP11.4□□□□□ -0.58
NUP43-204ENST00000403890 LRP2BPQ9P2M1 347 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.58
NUP43-204ENST00000403890 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
NUP43-204ENST00000403890 PTPRCP08575 1304 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 FLT1P17948 1338 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 XIRP2A4UGR9 3374 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 HLA-DOAP06340 250 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 ACRP10323 421 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 ACLYP53396 1101 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 PPP4CP60510 307 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 ACER1Q8TDN7 264 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 MROH8Q9H579 483 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 COPRSQ9NQ92 184 aa11.39□□□□□ -0.59
NUP43-204ENST00000403890 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
NUP43-204ENST00000403890 MROH7Q68CQ1 1323 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 CHD7Q9P2D1 2997 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
NUP43-204ENST00000403890 FAM86C2PA6NEL3 165 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 SMIM22K7EJ46 135 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 TLL1O43897 1013 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 UBTFL1P0CB47 393 aaPredicted RBP11.38□□□□□ -0.59
NUP43-204ENST00000403890 FCER1AP12319 257 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 MRE11P49959 708 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 NCAPG2Q86XI2 1143 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
NUP43-204ENST00000403890 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 COG5Q9UP83 839 aa11.38□□□□□ -0.59
NUP43-204ENST00000403890 YBX2Q9Y2T7 364 aaKnown RBP11.38□□□□□ -0.59
NUP43-204ENST00000403890 ZNF521Q96K83 1311 aa11.37□□□□□ -0.59
NUP43-204ENST00000403890 SIPA1L1O43166 1804 aa11.37□□□□□ -0.59
NUP43-204ENST00000403890 APBB1O00213 710 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms