RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PRPF3O43395 683 aaKnown RBP13.52□□□□□ -0.25
RBM39-206ENST00000403542 CAPN2P17655 700 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 PRDX5P30044 214 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 STAT6P42226 847 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 TAF3Q5VWG9 929 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 GSPT2Q8IYD1 628 aaKnown RBP13.52□□□□□ -0.25
RBM39-206ENST00000403542 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 RTL9Q8NET4 1388 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 FAM205AQ6ZU69 1335 aa13.52□□□□□ -0.25
RBM39-206ENST00000403542 TTC26A0AVF1 554 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 RAD51AP2Q09MP3 1159 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 ZSCAN26Q16670 478 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 TCP11X2Q5H9J9 407 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 FKBP15Q5T1M5 1219 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
RBM39-206ENST00000403542 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 FERMT2Q96AC1 680 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
RBM39-206ENST00000403542 CTAGE1Q96RT6 745 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 NAPGQ99747 312 aaPredicted RBP13.51□□□□□ -0.25
RBM39-206ENST00000403542 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 CCDC151A5D8V7 595 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 NKRFO15226 690 aaKnown RBP eCLIP13.51□□□□□ -0.25
RBM39-206ENST00000403542 RPN1P04843 607 aaKnown RBP13.51□□□□□ -0.25
RBM39-206ENST00000403542 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 GOLGA8HP0CJ92 632 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 BEND6Q5SZJ8 279 aaPredicted RBP13.51□□□□□ -0.25
RBM39-206ENST00000403542 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
RBM39-206ENST00000403542 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 LCMT1Q9UIC8 334 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 STRCP1A6NGW2 1772 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 MYH8P13535 1937 aa13.51□□□□□ -0.25
RBM39-206ENST00000403542 ERVV-1B6SEH8 477 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 USP17L8P0C7I0 530 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 FAM193AP78312 1265 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 DUSP10Q9Y6W6 482 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 SCG2P13521 617 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 ARHGAP25P42331 645 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 CYP27A1Q02318 531 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 ITPK1Q13572 414 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 E2F4Q16254 413 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 PDXDC2PQ6P474 469 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 FOXR1Q6PIV2 292 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 PSMB7Q99436 277 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 CCDC87Q9NVE4 849 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 TRIM66O15016 1216 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 MECOMQ03112 1051 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 GPS2Q13227 327 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 INF2Q27J81 1249 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 CAVIN4Q5BKX8 364 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 ELOA2Q8IYF1 753 aaPredicted RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 TRIM47Q96LD4 638 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 UIMC1Q96RL1 719 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
RBM39-206ENST00000403542 REXO2Q9Y3B8 237 aaKnown RBP13.5□□□□□ -0.25
RBM39-206ENST00000403542 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 BCL9O00512 1426 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 MACROD2A1Z1Q3 448 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 B4DLN1 442 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 ZNF185O15231 689 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 UBXN6Q9BZV1 441 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 EPN1Q9Y6I3 576 aaPredicted RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 COL4A1P02462 1669 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 USP17L3A6NCW0 530 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 USP17L4A6NCW7 530 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 NTSR2O95665 410 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 ATP1A1P05023 1023 aaKnown RBP13.49□□□□□ -0.25
RBM39-206ENST00000403542 CCDC122Q5T0U0 273 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 USP17L1Q7RTZ2 530 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 TMTC1Q8IUR5 882 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 C10orf67Q8IYJ2 551 aa13.49□□□□□ -0.25
RBM39-206ENST00000403542 SLC44A5Q8NCS7 719 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms