RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
NDEL1-203ENST00000402554 WNK4Q96J92 1243 aa15.16■□□□□ 0.02
NDEL1-203ENST00000402554 ZNF287Q9HBT7 754 aa15.16■□□□□ 0.02
NDEL1-203ENST00000402554 TSKSQ9UJT2 592 aa15.16■□□□□ 0.02
NDEL1-203ENST00000402554 DOCK1Q14185 1865 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 MYH15Q9Y2K3 1946 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 FOXN1O15353 648 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 MAP2K2P36507 400 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 PLCD1P51178 756 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 TFAP4Q01664 338 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 TRIM29Q14134 588 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 BRAPQ7Z569 592 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
NDEL1-203ENST00000402554 AIFM3Q96NN9 605 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 WBP1LQ9NX94 342 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 SNCAIPQ9Y6H5 919 aa15.15■□□□□ 0.02
NDEL1-203ENST00000402554 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
NDEL1-203ENST00000402554 GOLGA6L4A6NEF3 574 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 NMT2O60551 498 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 CCDC178Q5BJE1 867 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 CCDC183Q5T5S1 534 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 KRT40Q6A162 431 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 ZNF444Q8N0Y2 327 aaPredicted RBP15.14■□□□□ 0.01
NDEL1-203ENST00000402554 OPTNQ96CV9 577 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 GRPEL1Q9HAV7 217 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 RBM28Q9NW13 759 aaKnown RBP15.14■□□□□ 0.01
NDEL1-203ENST00000402554 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.14■□□□□ 0.01
NDEL1-203ENST00000402554 CSADQ9Y600 493 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 SYCE3A1L190 88 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
NDEL1-203ENST00000402554 TROAPQ12815 778 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 HOOK2Q96ED9 719 aa15.14■□□□□ 0.01
NDEL1-203ENST00000402554 DEXIO95424 95 aa15.13■□□□□ 0.01
NDEL1-203ENST00000402554 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
NDEL1-203ENST00000402554 MAP2K1Q02750 393 aaPredicted RBP15.13■□□□□ 0.01
NDEL1-203ENST00000402554 C16orf86Q6ZW13 317 aa15.13■□□□□ 0.01
NDEL1-203ENST00000402554 DGKHQ86XP1 1220 aa15.13■□□□□ 0.01
NDEL1-203ENST00000402554 OTUD5Q96G74 571 aa15.13■□□□□ 0.01
NDEL1-203ENST00000402554 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
NDEL1-203ENST00000402554 RCOR1Q9UKL0 485 aa15.13■□□□□ 0.01
NDEL1-203ENST00000402554 PHF20L1A8MW92 1017 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 TSPY3P0CV98 308 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 TSPY8P0CW00 308 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 CDK8P49336 464 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 CEBPZQ03701 1054 aaKnown RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 LRSAM1Q6UWE0 723 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 CMTR1Q8N1G2 835 aaKnown RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 CCDC82Q8N4S0 544 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 SLC44A5Q8NCS7 719 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 ZNF112Q9UJU3 913 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 PHIPQ8WWQ0 1821 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 KIF28PB7ZC32 967 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 LETM1O95202 739 aaPredicted RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 RASA1P20936 1047 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 AKAP17AQ02040 695 aaKnown RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 RCSD1Q6JBY9 416 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 CCDC84Q86UT8 332 aaPredicted RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 CTCFLQ8NI51 663 aaPredicted RBP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 KAT14Q9H8E8 782 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.12■□□□□ 0.01
NDEL1-203ENST00000402554 IL17RBQ9NRM6 502 aa15.12■□□□□ 0.01
NDEL1-203ENST00000402554 GUCY1A2P33402 732 aa15.11■□□□□ 0.01
NDEL1-203ENST00000402554 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
NDEL1-203ENST00000402554 MYSM1Q5VVJ2 828 aa15.11■□□□□ 0.01
NDEL1-203ENST00000402554 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
NDEL1-203ENST00000402554 FTOQ9C0B1 505 aaKnown RBP eCLIP15.11■□□□□ 0.01
NDEL1-203ENST00000402554 RTEL1Q9NZ71 1219 aa15.11■□□□□ 0.01
NDEL1-203ENST00000402554 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
NDEL1-203ENST00000402554 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
NDEL1-203ENST00000402554 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 SPDYE5A6NIY4 337 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 UNCXA6NJT0 531 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 PRPF3O43395 683 aaKnown RBP15.1■□□□□ 0.01
NDEL1-203ENST00000402554 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 ZBTB48P10074 688 aaPredicted RBP15.1■□□□□ 0.01
NDEL1-203ENST00000402554 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
NDEL1-203ENST00000402554 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 FUT2Q10981 343 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
NDEL1-203ENST00000402554 BICD2Q8TD16 824 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 POLR3EQ9NVU0 708 aa15.1■□□□□ 0.01
NDEL1-203ENST00000402554 TRPA1O75762 1119 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 MMP1P03956 469 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 LIG1P18858 919 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.017e-10■■□□□ 13.7
NDEL1-203ENST00000402554 KIF5BP33176 963 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 SCYL3Q8IZE3 742 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 PNMA1Q8ND90 353 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 NEDD1Q8NHV4 660 aa15.09■□□□□ 0.01
NDEL1-203ENST00000402554 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms