RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 ANP32AP39687 249 aaKnown RBP31.36■■■□□ 2.61
CGREF1-204ENST00000402550 ZCCHC17Q9NP64 241 aaKnown RBP31.36■■■□□ 2.61
CGREF1-204ENST00000402550 NDUFB10O96000 172 aa31.35■■■□□ 2.61
CGREF1-204ENST00000402550 SLC45A1Q9Y2W3 748 aa31.35■■■□□ 2.61
CGREF1-204ENST00000402550 ALDH1A1P00352 501 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 EVCP57679 992 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 HSCBQ8IWL3 235 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 ZNF654Q8IZM8 581 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 SNX21Q969T3 373 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 LARP6Q9BRS8 491 aaKnown RBP31.34■■■□□ 2.61
CGREF1-204ENST00000402550 RNF186Q9NXI6 227 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 SLFN13Q68D06 897 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 APOA5Q6Q788 366 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 RPAP3Q9H6T3 665 aaPredicted RBP31.34■■■□□ 2.61
CGREF1-204ENST00000402550 WBP1LQ9NX94 342 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 BRPF3Q9ULD4 1205 aa31.34■■■□□ 2.61
CGREF1-204ENST00000402550 RBM19Q9Y4C8 960 aaKnown RBP31.34■■■□□ 2.61
CGREF1-204ENST00000402550 WDR46O15213 610 aaKnown RBP31.33■■■□□ 2.61
CGREF1-204ENST00000402550 ZBTB43O43298 467 aa31.33■■■□□ 2.61
CGREF1-204ENST00000402550 DDAH1O94760 285 aa31.33■■■□□ 2.61
CGREF1-204ENST00000402550 CALM1P0DP23 149 aa31.33■■■□□ 2.61
CGREF1-204ENST00000402550 CALM2P0DP24 149 aa31.33■■■□□ 2.61
CGREF1-204ENST00000402550 CALM3P0DP25 149 aa31.33■■■□□ 2.61
CGREF1-204ENST00000402550 PABPC4Q13310 644 aaKnown RBP eCLIP31.33■■■□□ 2.61
CGREF1-204ENST00000402550 ZNF274Q96GC6 653 aaPredicted RBP31.33■■■□□ 2.61
CGREF1-204ENST00000402550 ZSCAN31Q96LW9 406 aaPredicted RBP31.33■■■□□ 2.61
CGREF1-204ENST00000402550 GOLGA8BA8MQT2 603 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L15C9J2P7 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L13C9JLJ4 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L11C9JVI0 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L18D6R9N7 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L22D6RA61 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L17D6RBQ6 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L19D6RCP7 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L20D6RJB6 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 TRPA1O75762 1119 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 CD2BP2O95400 341 aaKnown RBP31.32■■■□□ 2.6
CGREF1-204ENST00000402550 USP17L24Q0WX57 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 CATSPERGQ6ZRH7 1159 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 MICU3Q86XE3 530 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 NUP133Q8WUM0 1156 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 TPCN1Q9ULQ1 816 aa31.32■■■□□ 2.6
CGREF1-204ENST00000402550 RCAN1P53805 252 aa31.31■■■□□ 2.6
CGREF1-204ENST00000402550 NUP88Q99567 741 aaPredicted RBP31.31■■■□□ 2.6
CGREF1-204ENST00000402550 MTMR7Q9Y216 660 aa31.31■■■□□ 2.6
CGREF1-204ENST00000402550 FAM83BQ5T0W9 1011 aa31.3■■■□□ 2.6
CGREF1-204ENST00000402550 CHMP4CQ96CF2 233 aa31.3■■■□□ 2.6
CGREF1-204ENST00000402550 GMCL1Q96IK5 515 aa31.3■■■□□ 2.6
CGREF1-204ENST00000402550 ASCC2Q9H1I8 757 aaPredicted RBP31.3■■■□□ 2.6
CGREF1-204ENST00000402550 SH2B1Q9NRF2 756 aaPredicted RBP31.3■■■□□ 2.6
CGREF1-204ENST00000402550 CA12O43570 354 aa31.3■■■□□ 2.6
CGREF1-204ENST00000402550 CYP2C8P10632 490 aa31.3■■■□□ 2.6
CGREF1-204ENST00000402550 TAF1CQ15572 869 aaPredicted RBP31.3■■■□□ 2.6
CGREF1-204ENST00000402550 BEGAINQ9BUH8 593 aa31.3■■■□□ 2.6
CGREF1-204ENST00000402550 SLKQ9H2G2 1235 aaPredicted RBP31.3■■■□□ 2.6
CGREF1-204ENST00000402550 OSBPP22059 807 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 PDIA3P30101 505 aaKnown RBP31.29■■■□□ 2.6
CGREF1-204ENST00000402550 SLC1A4P43007 532 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 TROAPQ12815 778 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 BECN1Q14457 450 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 RASGRP2Q7LDG7 609 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 CTCFLQ8NI51 663 aaPredicted RBP31.29■■■□□ 2.6
CGREF1-204ENST00000402550 MYL10Q9BUA6 226 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 TANGO6Q9C0B7 1094 aa31.29■■■□□ 2.6
CGREF1-204ENST00000402550 PDHBP11177 359 aa31.28■■■□□ 2.6
CGREF1-204ENST00000402550 BMP3P12645 472 aa31.28■■■□□ 2.6
CGREF1-204ENST00000402550 METAP2P50579 478 aaKnown RBP eCLIP31.28■■■□□ 2.6
CGREF1-204ENST00000402550 P2RX7Q99572 595 aaKnown RBP31.28■■■□□ 2.6
CGREF1-204ENST00000402550 PNMA3Q9UL41 463 aa31.28■■■□□ 2.6
CGREF1-204ENST00000402550 SNHG28P0DPA3 235 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 KIF5BP33176 963 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 IRX3P78415 501 aaPredicted RBP31.27■■■□□ 2.6
CGREF1-204ENST00000402550 STK3Q13188 491 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 CRHR2Q13324 411 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 PPP2R5BQ15173 497 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 ME3Q16798 604 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 DCAF4Q8WV16 495 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 MAP3K14Q99558 947 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 CFHR5Q9BXR6 569 aa31.27■■■□□ 2.6
CGREF1-204ENST00000402550 GOLGA8AA7E2F4 631 aa31.26■■■□□ 2.6
CGREF1-204ENST00000402550 K7ELQ4 463 aaPredicted RBP31.26■■■□□ 2.6
CGREF1-204ENST00000402550 RXRAP19793 462 aa31.26■■■□□ 2.6
CGREF1-204ENST00000402550 COG2Q14746 738 aa31.26■■■□□ 2.6
CGREF1-204ENST00000402550 RAB11FIP4Q86YS3 637 aa31.26■■■□□ 2.6
CGREF1-204ENST00000402550 PARK7Q99497 189 aaKnown RBP31.26■■■□□ 2.6
CGREF1-204ENST00000402550 ZFYVE28Q9HCC9 887 aa31.26■■■□□ 2.6
CGREF1-204ENST00000402550 SAGE1Q9NXZ1 904 aa31.26■■■□□ 2.6
CGREF1-204ENST00000402550 CCDC196A0A1B0GTZ2 297 aa31.26■■■□□ 2.59
CGREF1-204ENST00000402550 TBC1D8O95759 1140 aa31.26■■■□□ 2.59
CGREF1-204ENST00000402550 KCTD1Q719H9 257 aa31.26■■■□□ 2.59
CGREF1-204ENST00000402550 FANCBQ8NB91 859 aa31.26■■■□□ 2.59
CGREF1-204ENST00000402550 TMX3Q96JJ7 454 aa31.26■■■□□ 2.59
CGREF1-204ENST00000402550 R3HDMLQ9H3Y0 253 aa31.26■■■□□ 2.59
CGREF1-204ENST00000402550 PARP1P09874 1014 aaKnown RBP31.25■■■□□ 2.59
CGREF1-204ENST00000402550 RTN1Q16799 776 aa31.25■■■□□ 2.59
CGREF1-204ENST00000402550 CCDC144CPQ8IYA2 1237 aa31.25■■■□□ 2.59
CGREF1-204ENST00000402550 FBXO28Q9NVF7 368 aa31.25■■■□□ 2.59
CGREF1-204ENST00000402550 HOXC10Q9NYD6 342 aa31.25■■■□□ 2.59
CGREF1-204ENST00000402550 ISY1Q9ULR0 285 aaKnown RBP31.25■■■□□ 2.59
CGREF1-204ENST00000402550 DHX16O60231 1041 aaKnown RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms