RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 KIFC2Q96AC6 838 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 TRIM34Q9BYJ4 488 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 ITGB4P16144 1822 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 ENC1O14682 589 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 ERCC5P28715 1186 aaPredicted RBP19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 STAT6P42226 847 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 KCNJ6P48051 423 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 UBXN1Q04323 297 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 KAT14Q9H8E8 782 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 ANKIB1Q9P2G1 1089 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 ZNF652Q9Y2D9 606 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 MRFAP1Q9Y605 127 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 EFCAB8A8MWE9 144 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 HNRNPH2P55795 449 aaKnown RBP19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 HPS3Q969F9 1004 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 TMEM60Q9H2L4 133 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 CALCOCO1Q9P1Z2 691 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 GUCA1BQ9UMX6 200 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 LRP6O75581 1613 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 KRT9P35527 623 aa19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 PMS1P54277 932 aaKnown RBP19.25■□□□□ 0.67
SNRNP70-202ENST00000401730 MYH3P11055 1940 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 KIF5CO60282 957 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 PRCPP42785 496 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 MAPKAPK5Q8IW41 473 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 TRIML1Q8N9V2 468 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 SPATA20Q8TB22 786 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 TGFBRAP1Q8WUH2 860 aa19.24■□□□□ 0.67
SNRNP70-202ENST00000401730 MFAP3LO75121 409 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 ERVK-24P63145 666 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 ST5P78524 1137 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 ATP2C1P98194 919 aaPredicted RBP19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 PNMA1Q8ND90 353 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 FERMT2Q96AC1 680 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 PCMTD1Q96MG8 357 aaPredicted RBP19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 CCDC194A0A1B0GVG4 234 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 KCNJ18B7U540 433 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 PAK1Q13153 545 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 KCNJ12Q14500 433 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 AMIGO3Q86WK7 504 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 AK7Q96M32 723 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 GDAP1L1Q96MZ0 367 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 NLRP3Q96P20 1036 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 GSDMAQ96QA5 445 aa19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 RBM28Q9NW13 759 aaKnown RBP19.23■□□□□ 0.67
SNRNP70-202ENST00000401730 ECM29Q5VYK3 1845 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 SH3RF1Q7Z6J0 888 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 SH3RF3Q8TEJ3 882 aaPredicted RBP19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 TNFRSF25Q93038 417 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 ANAPC4Q9UJX5 808 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 ZNF804BA4D1E1 1349 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 PHACTR2O75167 634 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 RPN1P04843 607 aaKnown RBP19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 TPM1P09493 284 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 OAS2P29728 719 aaKnown RBP19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 COPB1P53618 953 aaKnown RBP19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 CHMP4BP1P59074 171 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 NCAPH2Q6IBW4 605 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 CC2D1AQ6P1N0 951 aaPredicted RBP19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 CERS3Q8IU89 383 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
SNRNP70-202ENST00000401730 GNPATO15228 680 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 KLK7P49862 253 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 BLIDQ8IZY5 108 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 IL17RBQ9NRM6 502 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 HDAC6Q9UBN7 1215 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 TBC1D8O95759 1140 aa19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 SRRTQ9BXP5 876 aaKnown RBP19.21■□□□□ 0.67
SNRNP70-202ENST00000401730 NKRFO15226 690 aaKnown RBP eCLIP19.2■□□□□ 0.662e-18■■□□□ 13.7
SNRNP70-202ENST00000401730 TNNT3P45378 269 aaPredicted RBP19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 EIF6P56537 245 aaKnown RBP19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 CDKAL1Q5VV42 579 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 CAPZA3Q96KX2 299 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 ARFGAP3Q9NP61 516 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 SRGAP2O75044 1071 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 ZRANB2O95218 330 aaKnown RBP eCLIP19.2■□□□□ 0.665e-7■■■□□ 19.2
SNRNP70-202ENST00000401730 TSPY3P0CV98 308 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 TSPY8P0CW00 308 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 UBA7P41226 1012 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 SKIDA1Q1XH10 827 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 PDXDC2PQ6P474 469 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 GOLGA1Q92805 767 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 TRIM47Q96LD4 638 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 XIRP1Q702N8 1843 aaKnown RBP19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 CAPN2P17655 700 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 E2F4Q16254 413 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 PFKFB3Q16875 520 aaPredicted RBP19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 CCDC178Q5BJE1 867 aa19.2■□□□□ 0.66
SNRNP70-202ENST00000401730 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
SNRNP70-202ENST00000401730 CALM1P0DP23 149 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms