RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
CLIP4-203ENST00000401617 ERCC4Q92889 916 aaPredicted RBP14.05□□□□□ -0.16
CLIP4-203ENST00000401617 GPKOWQ92917 476 aaPredicted RBP eCLIP14.05□□□□□ -0.16
CLIP4-203ENST00000401617 FERMT2Q96AC1 680 aa14.05□□□□□ -0.16
CLIP4-203ENST00000401617 CCDC17Q96LX7 622 aa14.05□□□□□ -0.16
CLIP4-203ENST00000401617 RIOX1Q9H6W3 641 aa14.05□□□□□ -0.16
CLIP4-203ENST00000401617 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
CLIP4-203ENST00000401617 COL2A1P02458 1487 aaPredicted RBP14.04□□□□□ -0.16
CLIP4-203ENST00000401617 TTLL1O95922 423 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 GOLGA8HP0CJ92 632 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
CLIP4-203ENST00000401617 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
CLIP4-203ENST00000401617 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 KRBA2Q6ZNG9 492 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 RASGRP2Q7LDG7 609 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 METTL16Q86W50 562 aaKnown RBP14.04□□□□□ -0.16
CLIP4-203ENST00000401617 BPIFA3Q9BQP9 254 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 FAM13BQ9NYF5 915 aa14.04□□□□□ -0.16
CLIP4-203ENST00000401617 USP17L5A8MUK1 530 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 DPEP1P16444 411 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 SH3BP5LQ7L8J4 393 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
CLIP4-203ENST00000401617 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 COL4A5P29400 1685 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 NLRP12P59046 1061 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 PPP4R3BQ5MIZ7 849 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 PIK3AP1Q6ZUJ8 805 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 DHX40Q8IX18 779 aaKnown RBP14.03□□□□□ -0.16
CLIP4-203ENST00000401617 GMLQ99445 158 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 ZMYND12Q9H0C1 365 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
CLIP4-203ENST00000401617 A0A087WWV3 80 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 DDTLA6NHG4 134 aaPredicted RBP14.02□□□□□ -0.16
CLIP4-203ENST00000401617 ENTPD3O75355 529 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.16
CLIP4-203ENST00000401617 ZNF174Q15697 407 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 SPECC1Q5M775 1068 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 SARM1Q6SZW1 724 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 FOXP4Q8IVH2 680 aaPredicted RBP14.02□□□□□ -0.16
CLIP4-203ENST00000401617 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 ZKSCAN5Q9Y2L8 839 aa14.02□□□□□ -0.16
CLIP4-203ENST00000401617 CACNB3P54284 484 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 PTGDRQ13258 359 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 CFAP100Q494V2 611 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 TATDN1Q6P1N9 297 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 PLA2G4DQ86XP0 818 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 C4orf32Q8N8J7 132 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.17
CLIP4-203ENST00000401617 NAT10Q9H0A0 1025 aaKnown RBP14.02□□□□□ -0.17
CLIP4-203ENST00000401617 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 PCDHA6Q9UN73 950 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 MTMR7Q9Y216 660 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 PCDHA8Q9Y5H6 950 aa14.02□□□□□ -0.17
CLIP4-203ENST00000401617 BRCA1P38398 1863 aaKnown RBP14.02□□□□□ -0.17
CLIP4-203ENST00000401617 hCG_1984214I3L0E3 225 aa14.01□□□□□ -0.17
CLIP4-203ENST00000401617 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLIP4-203ENST00000401617 RSBN1LQ6PCB5 846 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-203ENST00000401617 USP49Q70CQ1 688 aa14.01□□□□□ -0.17
CLIP4-203ENST00000401617 HEATR3Q7Z4Q2 680 aa14.01□□□□□ -0.17
CLIP4-203ENST00000401617 ZNF713Q8N859 430 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-203ENST00000401617 CNNM3Q8NE01 707 aa14.01□□□□□ -0.17
CLIP4-203ENST00000401617 CCDC12Q8WUD4 166 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-203ENST00000401617 MKL1Q969V6 931 aa14.01□□□□□ -0.17
CLIP4-203ENST00000401617 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
CLIP4-203ENST00000401617 ESYT2A0FGR8 921 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 POLR2DO15514 142 aaKnown RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 ACTN4O43707 911 aaKnown RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 TCP10Q12799 353 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 DPCR1Q3MIW9 517 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 NT5DC1Q5TFE4 455 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 ARL6IP4Q66PJ3 421 aaKnown RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 LRRC47Q8N1G4 583 aaKnown RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 PRMT6Q96LA8 375 aaPredicted RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 FER1L6Q2WGJ9 1857 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 ZNF75DP51815 510 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 ZNF543Q08ER8 600 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 PNOCQ13519 176 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 SOGA3Q5TF21 947 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 PIGSQ96S52 555 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 TDRD3Q9H7E2 651 aaKnown RBP14□□□□□ -0.17
CLIP4-203ENST00000401617 NYAP2Q9P242 653 aa14□□□□□ -0.17
CLIP4-203ENST00000401617 GOLGA6L19H0YKK7 550 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
CLIP4-203ENST00000401617 SLURP2P0DP57 97 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 TGFB2P61812 414 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 PLCB2Q00722 1185 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 KANK3Q6NY19 840 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 RASGRP4Q8TDF6 673 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 UBA5Q9GZZ9 404 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 SERTAD1Q9UHV2 236 aa13.99□□□□□ -0.17
CLIP4-203ENST00000401617 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms