RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 MROH8Q9H579 483 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 PRKAG2Q9UGJ0 569 aa14.39□□□□□ -0.11
LINC00544-201ENST00000400540 WDR46O15213 610 aaKnown RBP14.38□□□□□ -0.11
LINC00544-201ENST00000400540 ADCYAP1R1P41586 468 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 CDK8P49336 464 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 SNX17Q15036 470 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 LRRC41Q15345 812 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 SHHQ15465 462 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 SH3RF1Q7Z6J0 888 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 PDLIM7Q9NR12 457 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 COG6Q9Y2V7 657 aa14.38□□□□□ -0.11
LINC00544-201ENST00000400540 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 USP17L21D6R901 530 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 PGK2P07205 417 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 EEF2P13639 858 aaKnown RBP14.37□□□□□ -0.11
LINC00544-201ENST00000400540 C16orf86Q6ZW13 317 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 RPAP2Q8IXW5 612 aaPredicted RBP14.37□□□□□ -0.11
LINC00544-201ENST00000400540 ABRAQ8N0Z2 381 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 BADQ92934 168 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 ZBED9Q6R2W3 1325 aa14.37□□□□□ -0.11
LINC00544-201ENST00000400540 TRIM43BA6NCK2 446 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 FCER1AP12319 257 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 TAL1P17542 331 aaPredicted RBP14.36□□□□□ -0.11
LINC00544-201ENST00000400540 ATP5JP18859 108 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 FAM109BQ6ICB4 259 aaPredicted RBP14.36□□□□□ -0.11
LINC00544-201ENST00000400540 TRIM43Q96BQ3 446 aaPredicted RBP14.36□□□□□ -0.11
LINC00544-201ENST00000400540 LENG1Q96BZ8 264 aaPredicted RBP14.36□□□□□ -0.11
LINC00544-201ENST00000400540 MMP19Q99542 508 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 HAUS7Q99871 368 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 SLC5A4Q9NY91 659 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 ADAMTS5Q9UNA0 930 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
LINC00544-201ENST00000400540 GBF1Q92538 1859 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 LRRC37A2A6NM11 1700 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 RAD21O60216 631 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 HMMRO75330 724 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 SLC25A27O95847 323 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 ITGB8P26012 769 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 ZNF697Q5TEC3 545 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00544-201ENST00000400540 REPS2Q8NFH8 660 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 CCDC17Q96LX7 622 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00544-201ENST00000400540 COL25A1Q9BXS0 654 aaPredicted RBP14.35□□□□□ -0.11
LINC00544-201ENST00000400540 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00544-201ENST00000400540 PUS7LQ9H0K6 701 aaKnown RBP14.35□□□□□ -0.11
LINC00544-201ENST00000400540 XPNPEP3Q9NQH7 507 aa14.35□□□□□ -0.11
LINC00544-201ENST00000400540 ZNF214Q9UL59 606 aaPredicted RBP14.35□□□□□ -0.11
LINC00544-201ENST00000400540 VWA5AO00534 786 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
LINC00544-201ENST00000400540 RAB11FIP3O75154 756 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 PGK1P00558 417 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 ZNF792Q3KQV3 632 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 RIOX2Q8IUF8 465 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 STK11IPQ8N1F8 1099 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
LINC00544-201ENST00000400540 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 PPP1R9AQ9ULJ8 1098 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 DDX19BQ9UMR2 479 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
LINC00544-201ENST00000400540 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.12
LINC00544-201ENST00000400540 RARBP10826 455 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 STAT3P40763 770 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 TLE2Q04725 743 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 PHF24Q9UPV7 400 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 LCTP09848 1927 aa14.33□□□□□ -0.12
LINC00544-201ENST00000400540 MUC3AQ02505 3323 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 REV3LO60673 3130 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 A0A1W2PQ45 241 aaPredicted RBP14.32□□□□□ -0.12
LINC00544-201ENST00000400540 A0A1W2PQY0 241 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 MS4A1P11836 297 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 EPHB4P54760 987 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 KCTD2Q14681 263 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 CDX2Q99626 313 aaPredicted RBP14.32□□□□□ -0.12
LINC00544-201ENST00000400540 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
LINC00544-201ENST00000400540 GOPCQ9HD26 462 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 CHD9Q3L8U1 2897 aa14.32□□□□□ -0.12
LINC00544-201ENST00000400540 PQBP1O60828 265 aaKnown RBP14.31□□□□□ -0.12
LINC00544-201ENST00000400540 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 CLTBP09497 229 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 RASA1P20936 1047 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 MYLIPQ8WY64 445 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
LINC00544-201ENST00000400540 NRBP1Q9UHY1 535 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 RIPK3Q9Y572 518 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
LINC00544-201ENST00000400540 AKR1A1P14550 325 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms