RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 ODR4Q5SWX8 454 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 ATRIPQ8WXE1 791 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 hCG_1642624A0A1W2PR95 340 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 KRT10P13645 584 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 TRIM14Q14142 442 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 BBS5Q8N3I7 341 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 SLC12A6Q9UHW9 1150 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 SYNRGQ9UMZ2 1314 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 ARHGEF37A1IGU5 675 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 CIB2O75838 187 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 CHMLP26374 656 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 RSAD2Q8WXG1 361 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 MIS12Q9H081 205 aa13.33□□□□□ -0.28
CACNA1C-213ENST00000399629 A0A1B0GVL5 298 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 AKR1B15C9JRZ8 316 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 SETDB1Q15047 1291 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 IPO11Q9UI26 975 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 MAP3K1Q13233 1512 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 SPICE1Q8N0Z3 855 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 NME8Q8N427 588 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 TSPOAP1O95153 1857 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 SARNPP82979 210 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 PRPSAP1Q14558 356 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 LGSNQ5TDP6 509 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 ANO1Q5XXA6 986 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 CHMP6Q96FZ7 201 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 CCDC68Q9H2F9 335 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 ANAPC5Q9UJX4 755 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 S100BP04271 92 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 MAP3K15Q6ZN16 1313 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 HADHQ16836 314 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 PHKBQ93100 1093 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
CACNA1C-213ENST00000399629 NPR1P16066 1061 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 KRT33BQ14525 404 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 USP19O94966 1318 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 PCDHA1Q9Y5I3 950 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 ATP7AQ04656 1500 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 ZBTB7AO95365 584 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 CC2D2BQ6DHV5 1058 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 NUCKS1Q9H1E3 243 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 ERCC3P19447 782 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 VAV2P52735 878 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 PALM2Q8IXS6 379 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 RAB20Q9NX57 234 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 ASIC3Q9UHC3 531 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 KCNH3Q9ULD8 1083 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 NEURL1BA8MQ27 555 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 DPYSL4O14531 572 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 IVLP07476 585 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 NUP58Q9BVL2 599 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
CACNA1C-213ENST00000399629 CUTAO60888 179 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 BBOX1O75936 387 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 GNA14O95837 355 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 SLC9C1Q4G0N8 1177 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 CPSF3Q9UKF6 684 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 MAST1Q9Y2H9 1570 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 DLATP10515 647 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 BEND3Q5T5X7 828 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 GOLGA5Q8TBA6 731 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 KCNJ14Q9UNX9 436 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 IL13P35225 146 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 LACTBP83111 547 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 TYRO3Q06418 890 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 PPP2R5AQ15172 486 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms