RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 PRSS12P56730 875 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 PDE1CQ14123 709 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 CDCA2Q69YH5 1023 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 PPP1R42Q7Z4L9 355 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 SAMD14Q8IZD0 417 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 NKX2-3Q8TAU0 364 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 IPCEF1Q8WWN9 437 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 IWS1Q96ST2 819 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 ATG3Q9NT62 314 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 SLIT3O75094 1523 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 PHLPP1O60346 1717 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 TOR1BO14657 336 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 UBTFL1P0CB47 393 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 HMGN5P82970 282 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 GUCA2AQ02747 115 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 TEFQ10587 303 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 CHAF1AQ13111 956 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 COL9A3Q14050 684 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 KRT72Q14CN4 511 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 TCEANC2Q96MN5 208 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 SMAD5Q99717 465 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 USP26Q9BXU7 913 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 USP44Q9H0E7 712 aa7.16□□□□□ -1.26
TRAPPC13-202ENST00000399438 PEAK1Q9H792 1746 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 PHRF1Q9P1Y6 1649 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 UBAP1LF5GYI3 381 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 ARIH2O95376 493 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 TRPC1P48995 793 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 COPAP53621 1224 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 PPP2R5BQ15173 497 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 CAVIN1Q6NZI2 390 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 CCDC129Q6ZRS4 1044 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 RASGRP2Q7LDG7 609 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 OTOP3Q7RTS5 596 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 KCT2Q8NC54 265 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 ITFG2Q969R8 447 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 SNX21Q969T3 373 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 AP1M1Q9BXS5 423 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 EFR3BQ9Y2G0 817 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 PTCH2Q9Y6C5 1203 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 DLG5Q8TDM6 1919 aa7.15□□□□□ -1.26
TRAPPC13-202ENST00000399438 SOS1Q07889 1333 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 SPATA31A3Q5VYP0 1347 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 SMTNL1A8MU46 457 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 PTCD1O75127 700 aaKnown RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 BIRC3Q13489 604 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 TSGA10IPQ3SY00 556 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 TUBB8Q3ZCM7 444 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 MEI1Q5TIA1 1274 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 C16orf87Q6PH81 154 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 HLA-CQ95604 372 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 DHX36Q9H2U1 1008 aaKnown RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 PRKAG3Q9UGI9 489 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 NSFL1CQ9UNZ2 370 aaKnown RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 TMX2Q9Y320 296 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 MAGED1Q9Y5V3 778 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 DDX49Q9Y6V7 483 aaKnown RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 ABCA3Q99758 1704 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 COL22A1Q8NFW1 1626 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 NFAT5O94916 1531 aa7.15□□□□□ -1.27
TRAPPC13-202ENST00000399438 IGSF1Q8N6C5 1336 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 BTBD11A6QL63 1104 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ECEL1O95672 775 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 EYA4O95677 639 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 MX1P20591 662 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 GALEQ14376 348 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 AKAP4Q5JQC9 854 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 CCDC30Q5VVM6 783 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 CWC27Q6UX04 472 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 RNF214Q8ND24 703 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 PI4K2BQ8TCG2 481 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 GJA10Q969M2 543 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 CAMKK2Q96RR4 588 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 CCDC8Q9H0W5 538 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 GINM1Q9NU53 330 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 TBK1Q9UHD2 729 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZBBXA8MT70 800 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 RFPL1O75677 317 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 IDEP14735 1019 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 CAPN3P20807 821 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 CASP7P55210 303 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 PFKPQ01813 784 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 MFSD3Q96ES6 412 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 EDC3Q96F86 508 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 LRRCC1Q9C099 1032 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 NIF3L1Q9GZT8 377 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 STRN4Q9NRL3 753 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 TSKSQ9UJT2 592 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZNF180Q9UJW8 692 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ARHGEF10O15013 1369 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 A0A0G2JS52 829 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ANO9A1A5B4 782 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 C2orf72A6NCS6 295 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 J3KRW8 73 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 PDPK1O15530 556 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 FDX1P10109 184 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 RPL17P18621 184 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 STK3Q13188 491 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms