RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 ADAMTS5Q9UNA0 930 aa17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMIM11A-203ENST00000399299 CEP290O15078 2479 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 NMIQ13287 307 aaPredicted RBP17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 WDR78Q5VTH9 848 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 RILPL2Q969X0 211 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 CEP95Q96GE4 821 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 CRISPLD2Q9H0B8 497 aa17.68■□□□□ 0.42
SMIM11A-203ENST00000399299 F5H6K3 240 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 STRNO43815 780 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 TTLL1O95922 423 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 KLRC3Q07444 240 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 TRIM32Q13049 653 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 PPP4R3BQ5MIZ7 849 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 FAM83BQ5T0W9 1011 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 MROH8Q9H579 483 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 PPP1R9AQ9ULJ8 1098 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 CCDC171Q6TFL3 1326 aa17.67■□□□□ 0.42
SMIM11A-203ENST00000399299 NDUFB10O96000 172 aa17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 FGRP09769 529 aa17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 PRKAR2AP13861 404 aaKnown RBP17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 ERCC3P19447 782 aa17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 SDSP20132 328 aa17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 MFAP1P55081 439 aaKnown RBP17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 TFAP4Q01664 338 aa17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 GMCL1P1Q8NEA9 526 aa17.66■□□□□ 0.42
SMIM11A-203ENST00000399299 VWA5AO00534 786 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 ORC4O43929 436 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 RAD21O60216 631 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 FARP2O94887 1054 aaPredicted RBP17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 SLC25A27O95847 323 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 FGAP02671 866 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 HSPD1P10809 573 aaKnown RBP17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 CTDSPL2Q05D32 466 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 TMEM132BQ14DG7 1078 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 CCL14Q16627 93 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 FAM47AQ5JRC9 791 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 ABRAQ8N0Z2 381 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 SLF1Q9BQI6 1058 aa17.65■□□□□ 0.42
SMIM11A-203ENST00000399299 LAMA4Q16363 1823 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 HIP1O00291 1037 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 ADORA2AP29274 412 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 COPB2P35606 906 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 CACNB2Q08289 660 aaPredicted RBP17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 PLS1Q14651 629 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 RIOX2Q8IUF8 465 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 ANKLE1Q8NAG6 615 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 NUP88Q99567 741 aaPredicted RBP17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 ZNFX1Q9P2E3 1918 aaKnown RBP17.64■□□□□ 0.41
SMIM11A-203ENST00000399299 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 TSPY2A6NKD2 308 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 IGHA2P01877 340 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 IRX6P78412 446 aaPredicted RBP17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 MFSD14CQ5VZR4 134 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 NCAPG2Q86XI2 1143 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 PRPF38AQ8NAV1 312 aaKnown RBP17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 HTATIP2Q9BUP3 242 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
SMIM11A-203ENST00000399299 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 STAT3P40763 770 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 OLFML2BQ68BL8 750 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 DPP9Q86TI2 863 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 LRRC47Q8N1G4 583 aaKnown RBP17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 SLC5A4Q9NY91 659 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 FLRT1Q9NZU1 646 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 OGDHLQ9ULD0 1010 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 TACC3Q9Y6A5 838 aa17.62■□□□□ 0.41
SMIM11A-203ENST00000399299 PLXNA1Q9UIW2 1896 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 ATP2A1O14983 1001 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 RANBP6O60518 1105 aaKnown RBP17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 FCER1AP12319 257 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 PDE4AP27815 886 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 NOVP48745 357 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 GMCL1Q96IK5 515 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 IL17RBQ9NRM6 502 aa17.61■□□□□ 0.41
SMIM11A-203ENST00000399299 FDX1P10109 184 aa17.6■□□□□ 0.41
SMIM11A-203ENST00000399299 BMP3P12645 472 aa17.6■□□□□ 0.41
SMIM11A-203ENST00000399299 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
SMIM11A-203ENST00000399299 CWC27Q6UX04 472 aaKnown RBP17.6■□□□□ 0.41
SMIM11A-203ENST00000399299 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
SMIM11A-203ENST00000399299 STX8Q9UNK0 236 aa17.6■□□□□ 0.41
SMIM11A-203ENST00000399299 PLA2G6O60733 806 aa17.59■□□□□ 0.41
SMIM11A-203ENST00000399299 COBLO75128 1261 aa17.59■□□□□ 0.41
SMIM11A-203ENST00000399299 CCND3P30281 292 aaPredicted RBP17.59■□□□□ 0.41
SMIM11A-203ENST00000399299 TTC22Q5TAA0 569 aa17.59■□□□□ 0.41
SMIM11A-203ENST00000399299 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms