RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 YTHDC2Q9H6S0 1430 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 TOP2BQ02880 1626 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 PTPN23Q9H3S7 1636 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 ZNF189O75820 626 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 MX1P20591 662 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 RAD51Q06609 339 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 AKNAD1Q5T1N1 836 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 GTF3C2Q8WUA4 911 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 STMN2Q93045 179 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 KDM4CQ9H3R0 1056 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 PARP2Q9UGN5 583 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 ADGBQ8N7X0 1667 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 A6NJR5 290 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 GOLGA8JA6NMD2 632 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 TRAPPC3O43617 180 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 F13A1P00488 732 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 KPNA2P52292 529 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 NR1H3Q13133 447 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 SURF1Q15526 300 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 CCDC38Q502W7 563 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 C2CD5Q86YS7 1000 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 PIM2Q9P1W9 311 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 PSDA5PKW4 1024 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 DNAJC8O75937 253 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 HARSP12081 509 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 GUCA1AP43080 201 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 EXOSC9Q06265 439 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 PPP2R5EQ16537 467 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 PTPRKQ15262 1439 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 DUOX2Q9NRD8 1548 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 DENND3A2RUS2 1198 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 K7ELQ4 463 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 CASQ2O14958 399 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 TNNC1P63316 161 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 PRR16Q569H4 304 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 DCAF17Q5H9S7 520 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 ADAT2Q7Z6V5 191 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 MAGEB6Q8N7X4 407 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 PALMDQ9NP74 551 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ZSCAN32Q9NX65 697 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 MROH5Q6ZUA9 1318 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 IRS4O14654 1257 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 PDE8AO60658 829 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 GBP1P32455 592 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 LIG4P49917 911 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ASIC1P78348 528 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 PTPAQ15257 358 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 IFIH1Q9BYX4 1025 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ABI2Q9NYB9 513 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 TESPA1A2RU30 521 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 N4BP3O15049 544 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 PCP11498 1178 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 PAMP19021 973 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 GCKP35557 465 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ZNF75DP51815 510 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ST8SIA6P61647 398 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 IGBP1P78318 339 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 DHX32Q7L7V1 743 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 CCDC13Q8IYE1 715 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 TTC30BQ8N4P2 665 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 BAG1Q99933 345 aaPredicted RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 EPS15L1Q9UBC2 864 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 KDM5AP29375 1690 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 KIAA1107Q9UPP5 1409 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 RAPGEF6Q8TEU7 1601 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 EPHB1P54762 984 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 SLC9C2Q5TAH2 1124 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 RC3H1Q5TC82 1133 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 CAPZA3Q96KX2 299 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 PDE4DIPQ5VU43 2346 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 I3L4J1 428 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 N4BP1O75113 896 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 PPP2R5CQ13362 524 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 SYCE1Q8N0S2 351 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 CEP120Q8N960 986 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 IQCDQ96DY2 449 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 CTAGE9A4FU28 777 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ZNF263O14978 683 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 MYBL2P10244 700 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 CCDC93Q567U6 631 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 TTBK2Q6IQ55 1244 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 CDKL2Q92772 493 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 BZW2Q9Y6E2 419 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 GAS7O60861 476 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 RPLP2P05387 115 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 STX1AQ16623 288 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 SLC9C1Q4G0N8 1177 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 POLR2DO15514 142 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 ARL4AP40617 200 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 SYKP43405 635 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 KRT17Q04695 432 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 MIS18BP1Q6P0N0 1132 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 ZNF365Q70YC5 407 aa5.5□□□□□ -1.53
TTC3-204ENST00000399017 DHX36Q9H2U1 1008 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 MRPL44Q9H9J2 332 aaKnown RBP5.5□□□□□ -1.53
TTC3-204ENST00000399017 CYBBP04839 570 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 AOC3Q16853 763 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 MAP7D3Q8IWC1 876 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms