RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 NEXMIFQ5QGS0 1516 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 RPS6KB1P23443 525 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 FAM227BQ96M60 508 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 PUS3Q9BZE2 481 aaKnown RBP15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 ZEB2O60315 1214 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 ECE2O60344 883 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 FLOT1O75955 427 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 PRPF6O94906 941 aaKnown RBP15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 IFRD2Q12894 506 aaPredicted RBP15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 RC3H1Q5TC82 1133 aaKnown RBP15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 DPP9Q86TI2 863 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 MYCT1Q8N699 235 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 TTLL3Q9Y4R7 772 aa15.85■□□□□ 0.13
PCDHA11-201ENST00000398640 IQSEC2Q5JU85 1478 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 SLC27A2O14975 620 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 SLU7O95391 586 aaKnown RBP15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 DEXIO95424 95 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 PLCD1P51178 756 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 CCDC122Q5T0U0 273 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 CCDC160A6NGH7 325 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 USP17L12C9JPN9 530 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 USP17L21D6R901 530 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 SLC15A2Q16348 729 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 TBC1D10BQ4KMP7 808 aaPredicted RBP15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 SLC16A10Q8TF71 515 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 MTUS1Q9ULD2 1270 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 ELP1O95163 1332 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 A0A0G2JLW4 131 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 CRCPO75575 148 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 PHKA1P46020 1223 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 INF2Q27J81 1249 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 DYMQ7RTS9 669 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 SPATA24Q86W54 205 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 PRIMPOLQ96LW4 560 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 TIGD1Q96MW7 591 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 ANKRD35Q8N283 1001 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 BRIP1Q9BX63 1249 aa15.84■□□□□ 0.13
PCDHA11-201ENST00000398640 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.13
PCDHA11-201ENST00000398640 IGBP1P78318 339 aa15.83■□□□□ 0.13
PCDHA11-201ENST00000398640 KIAA1524Q8TCG1 905 aa15.83■□□□□ 0.13
PCDHA11-201ENST00000398640 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 CALCOCO2Q13137 446 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 NLRX1Q86UT6 975 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 FAM193BQ96PV7 902 aaPredicted RBP15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 MED10Q9BTT4 135 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 FAM204AQ9H8W3 233 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 MTRF1LQ9UGC7 380 aaKnown RBP15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 GPR101Q96P66 508 aaPredicted RBP15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 PRKAG2Q9UGJ0 569 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 TPD52P55327 224 aaPredicted RBP15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 NFIXQ14938 502 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 SESTD1Q86VW0 696 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 ANKS4BQ8N8V4 417 aa15.83■□□□□ 0.12
PCDHA11-201ENST00000398640 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 CHRNA5P30532 468 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 LONRF3Q496Y0 759 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 PPANQ9NQ55 473 aaKnown RBP15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 PPP2R5CQ13362 524 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 KCTD2Q14681 263 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 PHKBQ93100 1093 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 TECPR2O15040 1411 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 PDE6AP16499 860 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 TPH2Q8IWU9 490 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 HACE1Q8IYU2 909 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 SNX29Q8TEQ0 813 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 AKR1B15C9JRZ8 316 aaPredicted RBP15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 POLR2DO15514 142 aaKnown RBP15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 CNNM4Q6P4Q7 775 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 TTC14Q96N46 770 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 VPS18Q9P253 973 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 ANAPC4Q9UJX5 808 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 KRT222Q8N1A0 295 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 CCT6BQ92526 530 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 TSGA10Q9BZW7 698 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 CLSTN2Q9H4D0 955 aa15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHA11-201ENST00000398640 PTPRUQ92729 1446 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 GNPTABQ3T906 1256 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 PLEKHG2Q9H7P9 1386 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 GCNT3O95395 438 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 TRIM7Q9C029 511 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 SETD1BQ9UPS6 1966 aaKnown RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 MNAT1P51948 309 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 FAM102BQ5T8I3 360 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 SDR42E1Q8WUS8 393 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 PFDN4Q9NQP4 134 aa15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 ANGEL1Q9UNK9 670 aaKnown RBP15.81■□□□□ 0.12
PCDHA11-201ENST00000398640 MED14O60244 1454 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms