RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ECM2O94769 699 aaPredicted RBP29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 CPA1P15085 419 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 SLC1A4P43007 532 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 SART3Q15020 963 aaKnown RBP29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 TMEM67Q5HYA8 995 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 ANKRD13CQ8N6S4 541 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 PNMA1Q8ND90 353 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 ANKS1AQ92625 1134 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 GMCL1Q96IK5 515 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 TCEANC2Q96MN5 208 aa29.78■■■□□ 2.36
TMEM55B-202ENST00000398020 BMP3P12645 472 aa29.77■■■□□ 2.36
TMEM55B-202ENST00000398020 COG2Q14746 738 aa29.77■■■□□ 2.36
TMEM55B-202ENST00000398020 POTEEQ6S8J3 1075 aa29.77■■■□□ 2.36
TMEM55B-202ENST00000398020 KCTD1Q719H9 257 aa29.77■■■□□ 2.36
TMEM55B-202ENST00000398020 IGDCC4Q8TDY8 1250 aa29.77■■■□□ 2.36
TMEM55B-202ENST00000398020 CASP8AP2Q9UKL3 1982 aa29.76■■■□□ 2.36
TMEM55B-202ENST00000398020 SPDYE16A6NNV3 312 aaPredicted RBP29.76■■■□□ 2.36
TMEM55B-202ENST00000398020 WTAPQ15007 396 aa29.76■■■□□ 2.36
TMEM55B-202ENST00000398020 RLFQ13129 1914 aa29.76■■■□□ 2.35
TMEM55B-202ENST00000398020 PARP14Q460N5 1801 aa29.75■■■□□ 2.35
TMEM55B-202ENST00000398020 BCRP11274 1271 aa29.75■■■□□ 2.35
TMEM55B-202ENST00000398020 CCDC96Q2M329 555 aa29.75■■■□□ 2.35
TMEM55B-202ENST00000398020 PAGR1Q9BTK6 254 aa29.75■■■□□ 2.35
TMEM55B-202ENST00000398020 TXNRD2Q9NNW7 524 aa29.75■■■□□ 2.35
TMEM55B-202ENST00000398020 FRMPD2Q68DX3 1309 aaPredicted RBP29.75■■■□□ 2.35
TMEM55B-202ENST00000398020 EIF5BO60841 1220 aaKnown RBP29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 PDHBP11177 359 aa29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 GCLCP48506 637 aaPredicted RBP29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 SP3Q02447 781 aa29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 ATG4CQ96DT6 458 aa29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 HOXC10Q9NYD6 342 aa29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 RBPJLQ9UBG7 517 aa29.74■■■□□ 2.35
TMEM55B-202ENST00000398020 TMEM232C9JQI7 657 aa29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 FKTNO75072 461 aa29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 DSG3P32926 999 aa29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 NOM1Q5C9Z4 860 aaKnown RBP29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 DHX32Q7L7V1 743 aaKnown RBP29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 DCAF4Q8WV16 495 aa29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 LY9Q9HBG7 655 aa29.73■■■□□ 2.35
TMEM55B-202ENST00000398020 SH2B2O14492 632 aaPredicted RBP29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 EXOSC10Q01780 885 aaKnown RBP29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 TMEM87BQ96K49 555 aa29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 CASTP20810 708 aaKnown RBP29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 IKQ13123 557 aaPredicted RBP29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 BLOC1S2Q6QNY1 142 aa29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 KIFC2Q96AC6 838 aa29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 SLF1Q9BQI6 1058 aa29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 GPCPD1Q9NPB8 672 aa29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 PPP1R9AQ9ULJ8 1098 aa29.72■■■□□ 2.35
TMEM55B-202ENST00000398020 HMGB1P09429 215 aaKnown RBP29.71■■■□□ 2.35
TMEM55B-202ENST00000398020 GOLGA8HP0CJ92 632 aa29.71■■■□□ 2.35
TMEM55B-202ENST00000398020 TTBK2Q6IQ55 1244 aa29.71■■■□□ 2.35
TMEM55B-202ENST00000398020 CD99L2Q8TCZ2 262 aa29.71■■■□□ 2.35
TMEM55B-202ENST00000398020 FEM1BQ9UK73 627 aa29.71■■■□□ 2.35
TMEM55B-202ENST00000398020 STAT2P52630 851 aa29.7■■■□□ 2.35
TMEM55B-202ENST00000398020 CAP1Q01518 475 aa29.7■■■□□ 2.35
TMEM55B-202ENST00000398020 FAM110CQ1W6H9 321 aa29.7■■■□□ 2.35
TMEM55B-202ENST00000398020 ARHGAP39Q9C0H5 1083 aa29.7■■■□□ 2.35
TMEM55B-202ENST00000398020 BTBD7Q9P203 1132 aa29.7■■■□□ 2.35
TMEM55B-202ENST00000398020 ZSWIM8A7E2V4 1837 aa29.7■■■□□ 2.35
TMEM55B-202ENST00000398020 CNMDO75829 334 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 SNHG28P0DPA3 235 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 PSMA5P28066 241 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 Q3C1V9 767 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 LBX2Q6XYB7 198 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 NFXL1Q6ZNB6 911 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 MTA3Q9BTC8 594 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 MYPNQ86TC9 1320 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 SLC16A2P36021 539 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 LACTBP83111 547 aaPredicted RBP29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 ZNF543Q08ER8 600 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 PRPF38AQ8NAV1 312 aaKnown RBP29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 GTF3C2Q8WUA4 911 aaPredicted RBP29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 MORF4L1Q9UBU8 362 aa29.69■■■□□ 2.34
TMEM55B-202ENST00000398020 WDR19Q8NEZ3 1342 aa29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 ERVK-9P63128 1117 aa29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 ERVK-24P63145 666 aa29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 GPRC5AQ8NFJ5 357 aa29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 UPF3BQ9BZI7 483 aaKnown RBP29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 RABGAP1Q9Y3P9 1069 aa29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 A0A0G2JMZ2 1700 aa29.68■■■□□ 2.34
TMEM55B-202ENST00000398020 VWA5AO00534 786 aa29.67■■■□□ 2.34
TMEM55B-202ENST00000398020 RPS6KB1P23443 525 aa29.67■■■□□ 2.34
TMEM55B-202ENST00000398020 MYL10Q9BUA6 226 aa29.67■■■□□ 2.34
TMEM55B-202ENST00000398020 COL11A1P12107 1806 aaPredicted RBP29.67■■■□□ 2.34
TMEM55B-202ENST00000398020 CTGFP29279 349 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 CATIPQ7Z7H3 387 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 CHURC1Q8WUH1 139 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 CPVLQ9H3G5 476 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 PRDM10Q9NQV6 1147 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 ADAMTS5Q9UNA0 930 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 CCDC69A6NI79 296 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 LIFRP42702 1097 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 FGD1P98174 961 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 PLS1Q14651 629 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 FAM160B2Q86V87 743 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 ERO1AQ96HE7 468 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 ZSWIM6Q9HCJ5 1215 aa29.66■■■□□ 2.34
TMEM55B-202ENST00000398020 SNAP25P60880 206 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 TROAPQ12815 778 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms