RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 BLIDQ8IZY5 108 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 NLRP12P59046 1061 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 NPY5RQ15761 445 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 ZNF662Q6ZS27 426 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 FERMT3Q86UX7 667 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 SYNE4Q8N205 404 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PAXBP1Q9Y5B6 917 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 FECHP22830 423 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 CIITAP33076 1130 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 GTF2F1P35269 517 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 NONOQ15233 471 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 FAM20AQ96MK3 541 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 GMLQ99445 158 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 DAGLAQ9Y4D2 1042 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 TAF6LQ9Y6J9 622 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 ITIH6Q6UXX5 1313 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 KDM3AQ9Y4C1 1321 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 WDHD1O75717 1129 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 MMP10P09238 476 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 ZNHIT6Q9NWK9 470 aaKnown RBP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 TFCP2L1Q9NZI6 479 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 A0A0G2JS52 829 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 M0R2N6 131 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 ARHGAP6O43182 974 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 FXR2P51116 673 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 HYIQ5T013 277 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 ILDR1Q86SU0 546 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 DHTKD1Q96HY7 919 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 CPA1P15085 419 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 TMEM266Q2M3C6 531 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 FAM160B2Q86V87 743 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 PLA2G4DQ86XP0 818 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 FAM114A1Q8IWE2 563 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 OGFOD1Q8N543 542 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 FAM151AQ8WW52 585 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 H7C1D1 291 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 TPM1P09493 284 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 BCRP11274 1271 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 SFPQP23246 707 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 TFAP4Q01664 338 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 NIPA1Q7RTP0 329 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 HELBQ8NG08 1087 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-206ENST00000397617 CD2APQ9Y5K6 639 aa6.66□□□□□ -1.34
PTPRD-206ENST00000397617 TSPY3P0CV98 308 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 TSPY8P0CW00 308 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 MRVI1Q9Y6F6 885 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 BICDL2A1A5D9 508 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 ASNSP08243 561 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 ZNF18P17022 549 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 COPB2P35606 906 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 ARID5BQ14865 1188 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 TTC38Q5R3I4 469 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 RRP36Q96EU6 259 aaKnown RBP6.65□□□□□ -1.34
PTPRD-206ENST00000397617 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 CGNQ9P2M7 1197 aaKnown RBP6.65□□□□□ -1.34
PTPRD-206ENST00000397617 MAFGO15525 162 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 UBA7P41226 1012 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 DACT2Q5SW24 774 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 SLC26A6Q9BXS9 759 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 STX10O60499 249 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 PARP1P09874 1014 aaKnown RBP6.65□□□□□ -1.34
PTPRD-206ENST00000397617 PFKFB1P16118 471 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 HAND2P61296 217 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 SF3B2Q13435 895 aaKnown RBP6.65□□□□□ -1.34
PTPRD-206ENST00000397617 CCDC96Q2M329 555 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 IGSF22Q8N9C0 903 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 CAMKK2Q96RR4 588 aa6.65□□□□□ -1.34
PTPRD-206ENST00000397617 USP17L3A6NCW0 530 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 USP17L4A6NCW7 530 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 BTBD18B2RXH4 712 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 RANBP6O60518 1105 aaKnown RBP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CDK17Q00537 523 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 ZNF543Q08ER8 600 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 PKN1Q16512 942 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 USP17L1Q7RTZ2 530 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CNPY4Q8N129 248 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 TMEM47Q9BQJ4 181 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 TIPINQ9BVW5 301 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 ECM29Q5VYK3 1845 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 TNNI2P48788 182 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CYB5R4Q7L1T6 521 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CNGA4Q8IV77 575 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 TTLL6Q8N841 843 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 ERMNQ8TAM6 284 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CALR3Q96L12 384 aaKnown RBP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 TCEANC2Q96MN5 208 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 SRP68Q9UHB9 627 aaKnown RBP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 FBXO2Q9UK22 296 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 MYO6Q9UM54 1294 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 PPME1Q9Y570 386 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CYP3A7-CYP3A51PA0A087WV96 503 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CLSTN1O94985 981 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CYP3A7P24462 503 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 SNRPFP62306 86 aaKnown RBP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 MORC3Q14149 939 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms