RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
NEDD9-203ENST00000397378 SRGAP3O43295 1099 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 IGSF3O75054 1194 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 UQCRFS1P1P0C7P4 283 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 VCAM1P19320 739 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 GORABQ5T7V8 394 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 KRT40Q6A162 431 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 MAML3Q96JK9 1138 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 C12orf42Q96LP6 360 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 TSEN34Q9BSV6 310 aaKnown RBP11.55□□□□□ -0.56
NEDD9-203ENST00000397378 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
NEDD9-203ENST00000397378 FLT1P17948 1338 aa11.55□□□□□ -0.56
NEDD9-203ENST00000397378 GH2P01242 217 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 GNAI3P08754 354 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-203ENST00000397378 ALADP13716 330 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 ERCC3P19447 782 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 POU3F3P20264 500 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-203ENST00000397378 SSTR3P32745 418 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-203ENST00000397378 CYP2C18P33260 490 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 USP14P54578 494 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-203ENST00000397378 MAPKAPK5Q8IW41 473 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 GLT1D1Q96MS3 346 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 RPAP3Q9H6T3 665 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-203ENST00000397378 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
NEDD9-203ENST00000397378 PCDHA11Q9Y5I1 949 aa11.54□□□□□ -0.56
NEDD9-203ENST00000397378 MOXD2PA6NHM9 499 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 ZBBXA8MT70 800 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
NEDD9-203ENST00000397378 ST18O60284 1047 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 ADAMTS4O75173 837 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 AKR1A1P14550 325 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 PLS1Q14651 629 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 NCAPG2Q86XI2 1143 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 GJD3Q8N144 294 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 SPATC1LQ9H0A9 340 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 NRBP1Q9UHY1 535 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 PALD1Q9ULE6 856 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 SLC4A7Q9Y6M7 1214 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 SYNRGQ9UMZ2 1314 aa11.53□□□□□ -0.56
NEDD9-203ENST00000397378 HLA-DOAP06340 250 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 CA3P07451 260 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 FOXK2Q01167 660 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 RAB3GAP1Q15042 981 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 KCNA10Q16322 511 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 ADGRA1Q86SQ6 560 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
NEDD9-203ENST00000397378 SHCBP1Q8NEM2 672 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 ROBO3Q96MS0 1386 aa11.52□□□□□ -0.57
NEDD9-203ENST00000397378 TRANK1O15050 2925 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 MYH8P13535 1937 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 FCER1AP12319 257 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 ATP2A2P16615 1042 aaKnown RBP11.51□□□□□ -0.57
NEDD9-203ENST00000397378 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
NEDD9-203ENST00000397378 TMEM67Q5HYA8 995 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 TATDN1Q6P1N9 297 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 ABRAQ8N0Z2 381 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 ARNTL2Q8WYA1 636 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 MROH8Q9H579 483 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
NEDD9-203ENST00000397378 COL4A4P53420 1690 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-203ENST00000397378 A0A0U1RQG5 324 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-203ENST00000397378 MYADML2A6NDP7 307 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 EPOPA6NHQ4 379 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 ARVCFO00192 962 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-203ENST00000397378 CDK7P50613 346 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 CCL23P55773 120 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 G3BP1Q13283 466 aaKnown RBP eCLIP11.5□□□□□ -0.57
NEDD9-203ENST00000397378 FAM178BQ8IXR5 827 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 FAM126BQ8IXS8 530 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 ACER1Q8TDN7 264 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-203ENST00000397378 TINF2Q9BSI4 451 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 TANGO6Q9C0B7 1094 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 EHD4Q9H223 541 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 HIPK3Q9H422 1215 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 SAP30BPQ9UHR5 308 aaKnown RBP11.5□□□□□ -0.57
NEDD9-203ENST00000397378 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 ELP1O95163 1332 aa11.5□□□□□ -0.57
NEDD9-203ENST00000397378 PGK2P07205 417 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 ASGR1P07306 291 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 ZNF865P0CJ78 1059 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-203ENST00000397378 COG2Q14746 738 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 CCDC158Q5M9N0 1113 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 TTC39AQ5SRH9 613 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-203ENST00000397378 CERS3Q8IU89 383 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 KLHDC9Q8NEP7 349 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 MMP19Q99542 508 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms