RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZMYND10O75800 440 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 CSF1RP07333 972 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 FECHP22830 423 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 GPTP24298 496 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 MCM3P25205 808 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 USP14P54578 494 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 SPAG1Q07617 926 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 ZNF174Q15697 407 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 ZNF654Q8IZM8 581 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 TTLL11Q8NHH1 800 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 CAPZA3Q96KX2 299 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 hCG_1642624A0A1W2PR95 340 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 PRKAB2O43741 272 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 KCNA4P22459 653 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 GSCP56915 257 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 UBXN1Q04323 297 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 TRIM14Q14142 442 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 KIF6Q6ZMV9 814 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 UBAC1Q9BSL1 405 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 LIMA1Q9UHB6 759 aaKnown RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 ATRNO75882 1429 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 RIC1Q4ADV7 1423 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 A0A087WUV0 522 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-206ENST00000397163 TCRBV5S4A2TA0A5A2 114 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 KCNJ18B7U540 433 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 SRGAP2O75044 1071 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 NDUFA10O95299 355 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 UQCRFS1P1P0C7P4 283 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 KRT2P35908 639 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 PPARDQ03181 441 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 MAP3K12Q12852 859 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 KCNJ12Q14500 433 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 ZBTB38Q8NAP3 1195 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-206ENST00000397163 CAGE1Q8TC20 777 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 FERMT2Q96AC1 680 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 CRACR2AQ9BSW2 395 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 MAPK8IP1Q9UQF2 711 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 RGPD5Q99666 1765 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 SYF2O95926 243 aaKnown RBP10.3□□□□□ -0.76
CAPN3-206ENST00000397163 PDE6BP35913 854 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 PAK1Q13153 545 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 STIM1Q13586 685 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 EARS2Q5JPH6 523 aaKnown RBP10.3□□□□□ -0.76
CAPN3-206ENST00000397163 CCDC122Q5T0U0 273 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 TRAPPC11Q7Z392 1133 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 HELBQ8NG08 1087 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-206ENST00000397163 NELFBQ8WX92 580 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 ZNF512BQ96KM6 892 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-206ENST00000397163 VIPAS39Q9H9C1 493 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 SLC24A3Q9HC58 644 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 SAR1BQ9Y6B6 198 aa10.3□□□□□ -0.76
CAPN3-206ENST00000397163 FRMD3A2A2Y4 597 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 MYO1FO00160 1098 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 PRDM1O75626 825 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 PDE8BO95263 885 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 TCP11X2Q5H9J9 407 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 MMS19Q96T76 1030 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 PLA2G12BQ9BX93 195 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 CD248Q9HCU0 757 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 HPCAL4Q9UM19 191 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 FAM169AQ9Y6X4 670 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 SPATA31A3Q5VYP0 1347 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 GSG1L2A8MUP6 293 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 BMP15O95972 392 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 ATP1A1P05023 1023 aaKnown RBP10.29□□□□□ -0.76
CAPN3-206ENST00000397163 AARSP49588 968 aaKnown RBP eCLIP10.29□□□□□ -0.76
CAPN3-206ENST00000397163 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
CAPN3-206ENST00000397163 KIAA1328Q86T90 577 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 OR8K1Q8NGG5 319 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 HAUS4Q9H6D7 363 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 RWDD2AQ9UIY3 292 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 TFR2Q9UP52 801 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 REXO2Q9Y3B8 237 aaKnown RBP10.29□□□□□ -0.76
CAPN3-206ENST00000397163 LRRC10BA6NIK2 292 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 TRIM28Q13263 835 aaKnown RBP10.29□□□□□ -0.76
CAPN3-206ENST00000397163 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
CAPN3-206ENST00000397163 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-206ENST00000397163 PSMD14O00487 310 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 WNT7AO00755 349 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 XDHP47989 1333 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 CKAP4Q07065 602 aaKnown RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 TTC38Q5R3I4 469 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 SPATA5Q8NB90 893 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 ZCRB1Q8TBF4 217 aaKnown RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 COG1Q8WTW3 980 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 TJP1Q07157 1748 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 TTC26A0AVF1 554 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 MINDY4BA8MYZ0 360 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 H0YHG0 523 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 PRPF6O94906 941 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms