RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TINF2Q9BSI4 451 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 CRNKL1Q9BZJ0 848 aaKnown RBP18.15■□□□□ 0.5
SEC13-206ENST00000397102 ZNF576Q9H609 170 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 DIS3Q9Y2L1 958 aaKnown RBP18.15■□□□□ 0.5
SEC13-206ENST00000397102 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
SEC13-206ENST00000397102 AKR1A1P14550 325 aa18.14■□□□□ 0.49
SEC13-206ENST00000397102 TMEM132BQ14DG7 1078 aa18.14■□□□□ 0.49
SEC13-206ENST00000397102 TSEN34Q9BSV6 310 aaKnown RBP18.14■□□□□ 0.49
SEC13-206ENST00000397102 SH2D4AQ9H788 454 aa18.14■□□□□ 0.49
SEC13-206ENST00000397102 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
SEC13-206ENST00000397102 SWAP70Q9UH65 585 aa18.14■□□□□ 0.49
SEC13-206ENST00000397102 TMX2Q9Y320 296 aa18.14■□□□□ 0.49
SEC13-206ENST00000397102 DCDC2CA8MYV0 355 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 ADAMTS4O75173 837 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 ZNF865P0CJ78 1059 aaPredicted RBP18.13■□□□□ 0.49
SEC13-206ENST00000397102 FAAP100Q0VG06 881 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 SPICE1Q8N0Z3 855 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 SLC44A5Q8NCS7 719 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 TIFAQ96CG3 184 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 STARD7Q9NQZ5 370 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 ADAMTS5Q9UNA0 930 aa18.13■□□□□ 0.49
SEC13-206ENST00000397102 PGK2P07205 417 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 TAL1P17542 331 aaPredicted RBP18.12■□□□□ 0.49
SEC13-206ENST00000397102 ICA1Q05084 483 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 KCTD2Q14681 263 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 TTF1Q15361 905 aaPredicted RBP18.12■□□□□ 0.49
SEC13-206ENST00000397102 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
SEC13-206ENST00000397102 RIOX2Q8IUF8 465 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 SIAH1Q8IUQ4 282 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 NUP133Q8WUM0 1156 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 C1orf115Q9H7X2 142 aa18.12■□□□□ 0.49
SEC13-206ENST00000397102 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
SEC13-206ENST00000397102 MOXD2PA6NHM9 499 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 TIMP1P01033 207 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 PDE6AP16499 860 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 ACLYP53396 1101 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 SLC9C2Q5TAH2 1124 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 CLEC10AQ8IUN9 316 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 GAS2L1Q99501 681 aaPredicted RBP18.11■□□□□ 0.49
SEC13-206ENST00000397102 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.11■□□□□ 0.497e-14■■■□□ 15.6
SEC13-206ENST00000397102 CNPY2Q9Y2B0 182 aa18.11■□□□□ 0.49
SEC13-206ENST00000397102 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
SEC13-206ENST00000397102 SYNRGQ9UMZ2 1314 aa18.1■□□□□ 0.49
SEC13-206ENST00000397102 CYP2D6P10635 497 aa18.1■□□□□ 0.49
SEC13-206ENST00000397102 AKR1B1P15121 316 aa18.1■□□□□ 0.49
SEC13-206ENST00000397102 COPB2P35606 906 aa18.1■□□□□ 0.49
SEC13-206ENST00000397102 ZKSCAN2Q63HK3 967 aa18.1■□□□□ 0.49
SEC13-206ENST00000397102 ATXN2LQ8WWM7 1075 aaKnown RBP18.1■□□□□ 0.49
SEC13-206ENST00000397102 LENG1Q96BZ8 264 aaPredicted RBP18.1■□□□□ 0.49
SEC13-206ENST00000397102 TBX21Q9UL17 535 aa18.1■□□□□ 0.49
SEC13-206ENST00000397102 MUC3AQ02505 3323 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 MROH7Q68CQ1 1323 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 ZNF532Q9HCE3 1301 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 STAT3P40763 770 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.49
SEC13-206ENST00000397102 AKNAD1Q5T1N1 836 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 MFSD5Q6N075 450 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 CCDC174Q6PII3 467 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 AACSQ86V21 672 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 MSL3Q8N5Y2 521 aaKnown RBP18.09■□□□□ 0.49
SEC13-206ENST00000397102 KLHDC9Q8NEP7 349 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 CCDC17Q96LX7 622 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 THEGQ9P2T0 379 aa18.09■□□□□ 0.49
SEC13-206ENST00000397102 VWA5AO00534 786 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 RASIP1Q5U651 963 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 ERC1Q8IUD2 1116 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 PBX4Q9BYU1 374 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 FBXO28Q9NVF7 368 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 ZNF214Q9UL59 606 aaPredicted RBP18.08■□□□□ 0.48
SEC13-206ENST00000397102 FAM184BQ9ULE4 1060 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 PPP1R9AQ9ULJ8 1098 aa18.08■□□□□ 0.48
SEC13-206ENST00000397102 ELP1O95163 1332 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 SYNGAP1Q96PV0 1343 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 TCRBV5S4A2TA0A5A2 114 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 KCNA10Q16322 511 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 TMEM240Q5SV17 173 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 CCSAPQ6IQ19 270 aaPredicted RBP18.07■□□□□ 0.48
SEC13-206ENST00000397102 CCDC129Q6ZRS4 1044 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 PPM1EQ8WY54 764 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 GLT1D1Q96MS3 346 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 ASB2Q96Q27 587 aa18.07■□□□□ 0.48
SEC13-206ENST00000397102 MYO9BQ13459 2157 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 EEF2P13639 858 aaKnown RBP18.06■□□□□ 0.48
SEC13-206ENST00000397102 CST5P28325 142 aaPredicted RBP18.06■□□□□ 0.48
SEC13-206ENST00000397102 PBX2P40425 430 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 C16orf59Q7L2K0 433 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 PRDM12Q9H4Q4 367 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 ATP8A2Q9NTI2 1148 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 EXOC6BQ9Y2D4 811 aa18.06■□□□□ 0.48
SEC13-206ENST00000397102 GBF1Q92538 1859 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 GRXCR1A8MXD5 290 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 DUSP11O75319 330 aaKnown RBP18.05■□□□□ 0.48
SEC13-206ENST00000397102 SNAI1O95863 264 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms