RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 BRAPQ7Z569 592 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-209ENST00000397036 MTMR8Q96EF0 704 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 AIFM3Q96NN9 605 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 KIAA1683Q9H0B3 1180 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 VCPKMTQ9H867 229 aa15.73■□□□□ 0.11
MCF2L-209ENST00000397036 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
MCF2L-209ENST00000397036 GOLGA6L22H0YM25 854 aa15.72■□□□□ 0.11
MCF2L-209ENST00000397036 PPP1R12BO60237 982 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-209ENST00000397036 INPP5BP32019 993 aa15.72■□□□□ 0.11
MCF2L-209ENST00000397036 GALNT17Q6IS24 598 aa15.72■□□□□ 0.11
MCF2L-209ENST00000397036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.72■□□□□ 0.11
MCF2L-209ENST00000397036 ACER1Q8TDN7 264 aa15.72■□□□□ 0.11
MCF2L-209ENST00000397036 RRP36Q96EU6 259 aaKnown RBP15.72■□□□□ 0.11
MCF2L-209ENST00000397036 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-209ENST00000397036 UNCXA6NJT0 531 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 MMP1P03956 469 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 GOLGA8HP0CJ92 632 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 BMP3P12645 472 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 MAP3K9P80192 1104 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 KIF23Q02241 960 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-209ENST00000397036 SAFBQ15424 915 aaKnown RBP eCLIP15.71■□□□□ 0.11
MCF2L-209ENST00000397036 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 FOXD4L5Q5VV16 416 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-209ENST00000397036 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 FOXD4L4Q8WXT5 416 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-209ENST00000397036 LPAR1Q92633 364 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 WRNIP1Q96S55 665 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 AS3MTQ9HBK9 375 aa15.71■□□□□ 0.11
MCF2L-209ENST00000397036 SSC5DA1L4H1 1573 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 UBE2Q2LH0YL09 131 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 NF2P35240 595 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 OTUD7BQ6GQQ9 843 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 UBA5Q9GZZ9 404 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 BARHL2Q9NY43 387 aa15.7■□□□□ 0.1
MCF2L-209ENST00000397036 POLR2AP24928 1970 aaKnown RBP15.7■□□□□ 0.1
MCF2L-209ENST00000397036 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 ADM5C9JUS6 153 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 PTPRAP18433 802 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 CALML3P27482 149 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 ECE1P42892 770 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 USP14P54578 494 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 GUCY1B3Q02153 619 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 FERMT3Q86UX7 667 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 TMEM87AQ8NBN3 555 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 CDCA5Q96FF9 252 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 JMJD4Q9H9V9 463 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 SEC63Q9UGP8 760 aaKnown RBP15.69■□□□□ 0.1
MCF2L-209ENST00000397036 MTMR7Q9Y216 660 aa15.69■□□□□ 0.1
MCF2L-209ENST00000397036 FRMPD2Q68DX3 1309 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-209ENST00000397036 C19orf81C9J6K1 198 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 IREB2P48200 963 aaKnown RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 KRT85P78386 507 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 MCTP1Q6DN14 999 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 RASGRP2Q7LDG7 609 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 TEX2Q8IWB9 1127 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 ADGRF4Q8IZF3 695 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 CCDC12Q8WUD4 166 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 CHURC1Q8WUH1 139 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 GJB4Q9NTQ9 266 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 CFAP45Q9UL16 551 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 MYH4Q9Y623 1939 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 ESYT2A0FGR8 921 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 KCTD1Q719H9 257 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 FAM160B2Q86V87 743 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 DIS3L2Q8IYB7 885 aaKnown RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 DAGLBQ8NCG7 672 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 ZNF280CQ8ND82 737 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 SHISA4Q96DD7 197 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 C12orf42Q96LP6 360 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 ZNF396Q96N95 335 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 SCAND2PQ9GZW5 306 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-209ENST00000397036 VPS54Q9P1Q0 977 aa15.68■□□□□ 0.1
MCF2L-209ENST00000397036 hCG_1642624A0A1W2PR95 340 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 STXBP3O00186 592 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 ZBTB5O15062 677 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 WDR46O15213 610 aaKnown RBP15.67■□□□□ 0.1
MCF2L-209ENST00000397036 BACE1P56817 501 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 DNM1Q05193 864 aaKnown RBP15.67■□□□□ 0.1
MCF2L-209ENST00000397036 TRAF1Q13077 416 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 NPY5RQ15761 445 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 PPP1R18Q6NYC8 613 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-209ENST00000397036 LDHDQ86WU2 507 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
MCF2L-209ENST00000397036 ZKSCAN4Q969J2 545 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-209ENST00000397036 PIGSQ96S52 555 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 ZMYND12Q9H0C1 365 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 BRMS1Q9HCU9 246 aa15.67■□□□□ 0.1
MCF2L-209ENST00000397036 FEM1BQ9UK73 627 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms