RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ZNF865P0CJ78 1059 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-202ENST00000396629 TAL1P17542 331 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-202ENST00000396629 C1QBPQ07021 282 aaKnown RBP10.27□□□□□ -0.77
SCFD1-202ENST00000396629 PLS1Q14651 629 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 ZNF792Q3KQV3 632 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 TMEM240Q5SV17 173 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 MFSD5Q6N075 450 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 MAGEB6Q8N7X4 407 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 ATG4CQ96DT6 458 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 FAM122AQ96E09 287 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 PBX4Q9BYU1 374 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 TBX21Q9UL17 535 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 MYO9BQ13459 2157 aa10.27□□□□□ -0.77
SCFD1-202ENST00000396629 IDH1O75874 414 aaKnown RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 AKR1A1P14550 325 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 PBX2P40425 430 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 PPIGQ13427 754 aaKnown RBP eCLIP10.26□□□□□ -0.777e-8■■□□□ 12.4
SCFD1-202ENST00000396629 TMEM132BQ14DG7 1078 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 KLHDC9Q8NEP7 349 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 PPM1EQ8WY54 764 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 UHRF1Q96T88 793 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 RIOK1Q9BRS2 568 aaKnown RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 PRDM12Q9H4Q4 367 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 DBNLQ9UJU6 430 aaKnown RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 ADAMTS5Q9UNA0 930 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 FLOT1O75955 427 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 POLR3DP05423 398 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 CDK7P50613 346 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 ACLYP53396 1101 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 ADGRE1Q14246 886 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-202ENST00000396629 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 RIOX2Q8IUF8 465 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 SSH3Q8TE77 659 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 NUP133Q8WUM0 1156 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 MMP19Q99542 508 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 STARD7Q9NQZ5 370 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 TMX2Q9Y320 296 aa10.26□□□□□ -0.77
SCFD1-202ENST00000396629 MOXD2PA6NHM9 499 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 MPHOSPH10O00566 681 aaKnown RBP10.25□□□□□ -0.77
SCFD1-202ENST00000396629 EVX2Q03828 476 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 MAP3K12Q12852 859 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 TMEM179Q6ZVK1 233 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 TLR7Q9NYK1 1049 aaKnown RBP10.25□□□□□ -0.77
SCFD1-202ENST00000396629 ELP1O95163 1332 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 MROH7Q68CQ1 1323 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 SYNRGQ9UMZ2 1314 aa10.25□□□□□ -0.77
SCFD1-202ENST00000396629 WDR46O15213 610 aaKnown RBP10.24□□□□□ -0.77
SCFD1-202ENST00000396629 PGK2P07205 417 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 ATP8B2P98198 1209 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 KCNA10Q16322 511 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 CCDC129Q6ZRS4 1044 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 LENG1Q96BZ8 264 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-202ENST00000396629 CCDC8Q9H0W5 538 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-202ENST00000396629 ANTXR1Q9H6X2 564 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 VCPKMTQ9H867 229 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
SCFD1-202ENST00000396629 CHD9Q3L8U1 2897 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 TRIM27P14373 513 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 OS9Q13438 667 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-202ENST00000396629 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
SCFD1-202ENST00000396629 ARHGEF10LQ9HCE6 1279 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 TNNQ9UQP3 1299 aa10.24□□□□□ -0.77
SCFD1-202ENST00000396629 NCOR1O75376 2440 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 MAGEB6P1A0A0J9YX57 407 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 CST5P28325 142 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 COPB2P35606 906 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 KCTD2Q14681 263 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 RAB30Q15771 203 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 CCDC85BQ15834 202 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 PSRC1Q6PGN9 363 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 ZNF365Q70YC5 407 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 TMEM199Q8N511 208 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 REPS2Q8NFH8 660 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 HERVK_113Q902F9 699 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 EAF2Q96CJ1 260 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 CRNKL1Q9BZJ0 848 aaKnown RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 MCM9Q9NXL9 1143 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 SWAP70Q9UH65 585 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 MSRAQ9UJ68 235 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 FAM184BQ9ULE4 1060 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 BAZ2AQ9UIF9 1905 aaKnown RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 SYNGAP1Q96PV0 1343 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 MCM3APO60318 1980 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 IPO8O15397 1037 aaKnown RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 DUSP11O75319 330 aaKnown RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 SNAI1O95863 264 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-202ENST00000396629 CSF2RAP15509 400 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 STAT3P40763 770 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 MAMDC4Q6UXC1 1216 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 SPICE1Q8N0Z3 855 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 C1QTNF1Q9BXJ1 281 aa10.23□□□□□ -0.77
SCFD1-202ENST00000396629 CXXC1Q9P0U4 656 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms