RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 CD44P16070 742 aaKnown RBP18.86■□□□□ 0.61
TRIM39-205ENST00000396551 GOLGA8FQ08AF8 430 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 GOLGA8DPQ0D2H9 430 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 E2F4Q16254 413 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 AMOTL1Q8IY63 956 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 ZNF444Q8N0Y2 327 aaPredicted RBP18.86■□□□□ 0.61
TRIM39-205ENST00000396551 RASGRP4Q8TDF6 673 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 TMEM47Q9BQJ4 181 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 SH3GLB2Q9NR46 395 aa18.86■□□□□ 0.61
TRIM39-205ENST00000396551 KCNJ6P48051 423 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 DHX8Q14562 1220 aaKnown RBP18.85■□□□□ 0.61
TRIM39-205ENST00000396551 RASGRP2Q7LDG7 609 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 C4orf32Q8N8J7 132 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 SAMSN1Q9NSI8 373 aaKnown RBP18.85■□□□□ 0.61
TRIM39-205ENST00000396551 FOCADQ5VW36 1801 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 M0R2N6 131 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 PPP1R13BQ96KQ4 1090 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 TMX1Q9H3N1 280 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 PCDHA4Q9UN74 947 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 CALML3P27482 149 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 RHBDL3P58872 404 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 CCDC178Q5BJE1 867 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 TBC1D16Q8TBP0 767 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 MTMR7Q9Y216 660 aa18.85■□□□□ 0.61
TRIM39-205ENST00000396551 WWC2Q6AWC2 1192 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 TEX11Q8IYF3 940 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
TRIM39-205ENST00000396551 FLT1P17948 1338 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 PSDA5PKW4 1024 aaPredicted RBP18.84■□□□□ 0.61
TRIM39-205ENST00000396551 TOP1P11387 765 aaKnown RBP18.84■□□□□ 0.61
TRIM39-205ENST00000396551 ERCC5P28715 1186 aaPredicted RBP18.84■□□□□ 0.61
TRIM39-205ENST00000396551 CDK8P49336 464 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 C16orf86Q6ZW13 317 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 MTERF4Q7Z6M4 381 aaKnown RBP18.84■□□□□ 0.61
TRIM39-205ENST00000396551 STAMQ92783 540 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
TRIM39-205ENST00000396551 PALM3A6NDB9 673 aaPredicted RBP18.83■□□□□ 0.61
TRIM39-205ENST00000396551 HOXA10P31260 410 aaPredicted RBP18.83■□□□□ 0.61
TRIM39-205ENST00000396551 TBX2Q13207 712 aaPredicted RBP18.83■□□□□ 0.61
TRIM39-205ENST00000396551 CUL4BQ13620 913 aa18.83■□□□□ 0.61
TRIM39-205ENST00000396551 CCDC112Q8NEF3 446 aa18.83■□□□□ 0.61
TRIM39-205ENST00000396551 BRWD3Q6RI45 1802 aa18.83■□□□□ 0.61
TRIM39-205ENST00000396551 POLRMTO00411 1230 aaKnown RBP18.83■□□□□ 0.61
TRIM39-205ENST00000396551 BBOX1O75936 387 aa18.83■□□□□ 0.61
TRIM39-205ENST00000396551 GNAQP50148 359 aa18.83■□□□□ 0.61
TRIM39-205ENST00000396551 MFSD14BQ5SR56 506 aa18.83■□□□□ 0.61
TRIM39-205ENST00000396551 ANKRD31Q8N7Z5 1873 aa18.83■□□□□ 0.6
TRIM39-205ENST00000396551 PDXDC2PQ6P474 469 aa18.83■□□□□ 0.6
TRIM39-205ENST00000396551 ANKRD7Q92527 254 aa18.83■□□□□ 0.6
TRIM39-205ENST00000396551 MTRQ99707 1265 aa18.83■□□□□ 0.6
TRIM39-205ENST00000396551 GOLGA8HP0CJ92 632 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 SMYD4Q8IYR2 804 aaPredicted RBP18.82■□□□□ 0.6
TRIM39-205ENST00000396551 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 GAKO14976 1311 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 STXBP3O00186 592 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 CDK11BP21127 795 aaKnown RBP18.82■□□□□ 0.6
TRIM39-205ENST00000396551 TMEM139Q8IV31 216 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 FAM163AQ96GL9 167 aaPredicted RBP18.82■□□□□ 0.6
TRIM39-205ENST00000396551 EYA3Q99504 573 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 PCDHA6Q9UN73 950 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 PCDHA8Q9Y5H6 950 aa18.82■□□□□ 0.6
TRIM39-205ENST00000396551 PPP1R3GB7ZBB8 358 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 SLC27A3Q5K4L6 730 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 CERS3Q8IU89 383 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 NCBP1Q09161 790 aaKnown RBP18.81■□□□□ 0.6
TRIM39-205ENST00000396551 APTXQ7Z2E3 356 aaKnown RBP18.81■□□□□ 0.6
TRIM39-205ENST00000396551 DAGLBQ8NCG7 672 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 CRAMP1Q96RY5 1269 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 BLZF1Q9H2G9 400 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
TRIM39-205ENST00000396551 STX17P56962 302 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 ARL6IP4Q66PJ3 421 aaKnown RBP18.81■□□□□ 0.6
TRIM39-205ENST00000396551 KLHL10Q6JEL2 608 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 HEATR3Q7Z4Q2 680 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 NEDD1Q8NHV4 660 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 BARHL2Q9NY43 387 aa18.81■□□□□ 0.6
TRIM39-205ENST00000396551 CT47A1Q5JQC4 288 aaPredicted RBP18.8■□□□□ 0.6
TRIM39-205ENST00000396551 IQUBQ8NA54 791 aa18.8■□□□□ 0.6
TRIM39-205ENST00000396551 NRDCO43847 1150 aa18.8■□□□□ 0.6
TRIM39-205ENST00000396551 CDC25AP30304 524 aa18.8■□□□□ 0.6
TRIM39-205ENST00000396551 HSPA1LP34931 641 aa18.8■□□□□ 0.6
TRIM39-205ENST00000396551 NAA30Q147X3 362 aaPredicted RBP18.8■□□□□ 0.6
TRIM39-205ENST00000396551 SYNRGQ9UMZ2 1314 aa18.8■□□□□ 0.6
TRIM39-205ENST00000396551 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 NR1I3Q14994 352 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 SPATA1Q5VX52 437 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 KLRF2D3W0D1 207 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 PLCG2P16885 1265 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 ZNF287Q9HBT7 754 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 A0A1B0GTH6 734 aa18.79■□□□□ 0.6
TRIM39-205ENST00000396551 LONP1P36776 959 aaKnown RBP18.79■□□□□ 0.6
TRIM39-205ENST00000396551 CCDC194A0A1B0GVG4 234 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 KIF2AO00139 706 aaPredicted RBP18.78■□□□□ 0.6
TRIM39-205ENST00000396551 TRIM37O94972 964 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 INF2Q27J81 1249 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 SPECC1LQ69YQ0 1117 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms