RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 CASQ1P31415 396 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 GNG11P61952 73 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 IGSF22Q8N9C0 903 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 AKR1B15C9JRZ8 316 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 CDK8P49336 464 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 FMR1Q06787 632 aaKnown RBP eCLIP13.07□□□□□ -0.325e-6■□□□□ 10.1
PDXDC1-202ENST00000396410 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 SPAG1Q07617 926 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 LRP5O75197 1615 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 COBLO75128 1261 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 GRM4Q14833 912 aa13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-202ENST00000396410 TRIM37O94972 964 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 NT5C2P49902 561 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 PAK1Q13153 545 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.324e-7■■□□□ 13.6
PDXDC1-202ENST00000396410 CALML4Q96GE6 196 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 UBXN4Q92575 508 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 FGRP09769 529 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 VPS16Q9H269 839 aa13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 ARGLU1Q9NWB6 273 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-202ENST00000396410 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 ZNF215Q9UL58 517 aaPredicted RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.323e-8■■□□□ 11.8
PDXDC1-202ENST00000396410 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 TM4SF1P30408 202 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 MDM2Q00987 491 aaPredicted RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 FUT2Q10981 343 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 E4F1Q66K89 784 aaPredicted RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 IPO7O95373 1038 aaKnown RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 RPN1P04843 607 aaKnown RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 AMPD3Q01432 767 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 EXOC1Q9NV70 894 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
PDXDC1-202ENST00000396410 PSMA7O14818 248 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 CCDC175P0C221 793 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 ASIC1P78348 528 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 MYH15Q9Y2K3 1946 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 CUL4BQ13620 913 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
PDXDC1-202ENST00000396410 PPP4CP60510 307 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 GRIK5Q16478 980 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 KIF5CO60282 957 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 BMP6P22004 513 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 SCNN1DP51172 638 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 UBXN1Q04323 297 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 CABP7Q86V35 215 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
PDXDC1-202ENST00000396410 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms