RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 GBP3Q9H0R5 595 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 IRF2BPLQ9H1B7 796 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 AKTIPQ9H8T0 292 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 LGR6Q9HBX8 967 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 ENAMQ9NRM1 1142 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 CGGBP1Q9UFW8 167 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 DAGLAQ9Y4D2 1042 aa7.07□□□□□ -1.28
HMGB1P10-201ENST00000395823 CNTNAP4Q9C0A0 1308 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 PPM1BO75688 479 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 NFICP08651 508 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 ZNF445P59923 1031 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 RNF4P78317 190 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 SNW1Q13573 536 aaKnown RBP7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 NBPF9Q3BBW0 867 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 SEZ6L2Q6UXD5 910 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 NSMFQ6X4W1 530 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 ADAT2Q7Z6V5 191 aaKnown RBP7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 TRIM59Q8IWR1 403 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 ARHGEF39Q8N4T4 335 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 FBLIM1Q8WUP2 373 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 RNF141Q8WVD5 230 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 BTN2A2Q8WVV5 523 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 EZH1Q92800 747 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 IER2Q9BTL4 223 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
HMGB1P10-201ENST00000395823 DLX3O60479 287 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 PDE8AO60658 829 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 LRRN2O75325 713 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 NOS3P29474 1203 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 SUMO1P63165 101 aaKnown RBP7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 SF1Q15637 639 aaKnown RBP7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 SGO2Q562F6 1265 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 PRRT3Q5FWE3 981 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 PRPF38AQ8NAV1 312 aaKnown RBP7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 CHAC2Q8WUX2 184 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 BRF1Q92994 677 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 FBXL18Q96ME1 805 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 TARS2Q9BW92 718 aaKnown RBP7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 ASPNQ9BXN1 380 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 METTL14Q9HCE5 456 aaKnown RBP7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 TRIM39Q9HCM9 518 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 PRDM10Q9NQV6 1147 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 SUGT1Q9Y2Z0 365 aa7.05□□□□□ -1.28
HMGB1P10-201ENST00000395823 DNAJC8O75937 253 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 EOMESO95936 686 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 ITGA4P13612 1032 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 GLB1P16278 677 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 USP11P51784 963 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 CDK5R2Q13319 367 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 UBR7Q8N806 425 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 SLC7A14Q8TBB6 771 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 CAAP1Q9H8G2 361 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 TYW1Q9NV66 732 aaKnown RBP7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 AKT3Q9Y243 479 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 ATP8A1Q9Y2Q0 1164 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 FHOD1Q9Y613 1164 aa7.04□□□□□ -1.28
HMGB1P10-201ENST00000395823 DNAJC25-GNG10A0A024R161 153 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 A0A087WZG4 1122 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 GAS2O43903 313 aaKnown RBP7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 KCNH1O95259 989 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 PARNO95453 639 aaKnown RBP7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 PDGFRBP09619 1106 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 COL8A1P27658 744 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 ETV3P41162 512 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 EVA1CP58658 441 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 NTRK3Q16288 839 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 GSTCDQ8NEC7 633 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 CEP41Q9BYV8 373 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 C1GALT1Q9NS00 363 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 PCDHB12Q9Y5F1 795 aa7.03□□□□□ -1.28
HMGB1P10-201ENST00000395823 BLACEA4D250 179 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 NOP56O00567 594 aaKnown RBP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 SART1O43290 800 aaKnown RBP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 CNGA1P29973 690 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 IREB2P48200 963 aaKnown RBP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 GFRA1P56159 465 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 TREML4Q6UXN2 200 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 TMC3Q7Z5M5 1100 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 GTF2IRD2Q86UP8 949 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 LRRTM3Q86VH5 581 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 ARMC10Q8N2F6 343 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 AFAP1L2Q8N4X5 818 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 FIBCD1Q8N539 461 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 TOP6BLQ8N6T0 577 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 SYTL5Q8TDW5 730 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 WFDC12Q8WWY7 111 aa7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 ZNF775Q96BV0 537 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P10-201ENST00000395823 NOL6Q9H6R4 1146 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms