RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PPP1R9AQ9ULJ8 1098 aa19.34■□□□□ 0.69
CXCL12-206ENST00000395795 COL11A1P12107 1806 aaPredicted RBP19.34■□□□□ 0.69
CXCL12-206ENST00000395795 NDUFB10O96000 172 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 IGHDP01880 384 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 CYP2C19P33261 490 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 TDO2P48775 406 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 ATP2B2Q01814 1243 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 VPS53Q5VIR6 699 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 WDR78Q5VTH9 848 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 NECAB2Q7Z6G3 386 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 MKL1Q969V6 931 aa19.33■□□□□ 0.68
CXCL12-206ENST00000395795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.33■□□□□ 0.68
CXCL12-206ENST00000395795 RANBP2P49792 3224 aaKnown RBP19.33■□□□□ 0.68
CXCL12-206ENST00000395795 FRMPD3Q5JV73 1810 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 VWA5AO00534 786 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 STRNO43815 780 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 CYBAP13498 195 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 CHRDL2Q6WN34 429 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 CEP95Q96GE4 821 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 MKNK2Q9HBH9 465 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 MTMR4Q9NYA4 1195 aa19.32■□□□□ 0.68
CXCL12-206ENST00000395795 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
CXCL12-206ENST00000395795 F5H6K3 240 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 APPP05067 770 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 KLRC3Q07444 240 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 PPARAQ07869 468 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 OLFML2BQ68BL8 750 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 RIOX2Q8IUF8 465 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 ABRAQ8N0Z2 381 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 NEDD1Q8NHV4 660 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 NBPF3Q9H094 633 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 MROH8Q9H579 483 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 GOPCQ9HD26 462 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 INCENPQ9NQS7 918 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 IVNS1ABPQ9Y6Y0 642 aa19.31■□□□□ 0.68
CXCL12-206ENST00000395795 LRRFIP1Q32MZ4 808 aaKnown RBP19.3■□□□□ 0.68
CXCL12-206ENST00000395795 MFSD14CQ5VZR4 134 aa19.3■□□□□ 0.68
CXCL12-206ENST00000395795 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
CXCL12-206ENST00000395795 CLIP2Q9UDT6 1046 aa19.3■□□□□ 0.68
CXCL12-206ENST00000395795 A0A0D9SFI3 127 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 AAMPQ13685 434 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 PLS1Q14651 629 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 FAM47AQ5JRC9 791 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 NCAPG2Q86XI2 1143 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 LNPKQ9C0E8 428 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 C11orf49Q9H6J7 331 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 CWC22Q9HCG8 908 aaKnown RBP19.29■□□□□ 0.68
CXCL12-206ENST00000395795 PCDH10Q9P2E7 1040 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 NR2E3Q9Y5X4 410 aa19.29■□□□□ 0.68
CXCL12-206ENST00000395795 MYH4Q9Y623 1939 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 EVI5O60447 810 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 FGRP09769 529 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 NOVP48745 357 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
CXCL12-206ENST00000395795 MAML3Q96JK9 1138 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 NAPBQ9H115 298 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 DDX20Q9UHI6 824 aaKnown RBP19.28■□□□□ 0.68
CXCL12-206ENST00000395795 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 RIPK3Q9Y572 518 aa19.28■□□□□ 0.68
CXCL12-206ENST00000395795 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.68
CXCL12-206ENST00000395795 SLC25A27O95847 323 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 STAT3P40763 770 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 CTDSPL2Q05D32 466 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 ALX1Q15699 326 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 PRAMEF19Q5SWL8 479 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 DPP9Q86TI2 863 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.68
CXCL12-206ENST00000395795 PLEKHM2Q8IWE5 1019 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 ZNF444Q8N0Y2 327 aaPredicted RBP19.27■□□□□ 0.68
CXCL12-206ENST00000395795 LRRC47Q8N1G4 583 aaKnown RBP19.27■□□□□ 0.68
CXCL12-206ENST00000395795 GMCL1P1Q8NEA9 526 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 SLF1Q9BQI6 1058 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 NACAP1Q9BZK3 213 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 HELLSQ9NRZ9 838 aa19.27■□□□□ 0.68
CXCL12-206ENST00000395795 ATP2A1O14983 1001 aa19.26■□□□□ 0.67
CXCL12-206ENST00000395795 TTLL1O95922 423 aa19.26■□□□□ 0.67
CXCL12-206ENST00000395795 PGK2P07205 417 aa19.26■□□□□ 0.67
CXCL12-206ENST00000395795 TFAP4Q01664 338 aa19.26■□□□□ 0.67
CXCL12-206ENST00000395795 NMT2O60551 498 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 FCER1AP12319 257 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 NUCB1Q02818 461 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 LRRC26Q2I0M4 334 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.25■□□□□ 0.67
CXCL12-206ENST00000395795 RASGRP2Q7LDG7 609 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 C7orf61Q8IZ16 206 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 GDF15Q99988 308 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 OSBPL3Q9H4L5 887 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
CXCL12-206ENST00000395795 DNAJC25-GNG10A0A024R161 153 aa19.24■□□□□ 0.67
CXCL12-206ENST00000395795 RAD21O60216 631 aa19.24■□□□□ 0.67
CXCL12-206ENST00000395795 FGAP02671 866 aa19.24■□□□□ 0.67
CXCL12-206ENST00000395795 PDE4BQ07343 736 aa19.24■□□□□ 0.67
CXCL12-206ENST00000395795 NMIQ13287 307 aaPredicted RBP19.24■□□□□ 0.67
CXCL12-206ENST00000395795 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms