RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 BLZF1Q9H2G9 400 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 USP40Q9NVE5 1235 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 STX17P56962 302 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 TCP10Q12799 353 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 WWC2Q6AWC2 1192 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 BLIDQ8IZY5 108 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 DDX4Q9NQI0 724 aaKnown RBP20.4■□□□□ 0.86
SREBF1-204ENST00000395756 HOOK1Q9UJC3 728 aaKnown RBP20.4■□□□□ 0.86
SREBF1-204ENST00000395756 GOLGA8FQ08AF8 430 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 GOLGA8DPQ0D2H9 430 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 INF2Q27J81 1249 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 TBC1D22AQ8WUA7 517 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 ZNF592Q92610 1267 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 TNFRSF25Q93038 417 aa20.4■□□□□ 0.86
SREBF1-204ENST00000395756 LY75O60449 1722 aa20.39■□□□□ 0.86
SREBF1-204ENST00000395756 FAM237AA0A1B0GTK4 181 aa20.39■□□□□ 0.85
SREBF1-204ENST00000395756 FAM196BA6NMK8 535 aa20.39■□□□□ 0.85
SREBF1-204ENST00000395756 MPHOSPH10O00566 681 aaKnown RBP20.39■□□□□ 0.85
SREBF1-204ENST00000395756 MYL5Q02045 173 aa20.39■□□□□ 0.85
SREBF1-204ENST00000395756 ZNF287Q9HBT7 754 aa20.39■□□□□ 0.85
SREBF1-204ENST00000395756 TMEM51Q9NW97 253 aa20.39■□□□□ 0.85
SREBF1-204ENST00000395756 SBF2Q86WG5 1849 aa20.39■□□□□ 0.85
SREBF1-204ENST00000395756 CCDC194A0A1B0GVG4 234 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 ACTN4O43707 911 aaKnown RBP20.38■□□□□ 0.85
SREBF1-204ENST00000395756 CDK11BP21127 795 aaKnown RBP20.38■□□□□ 0.85
SREBF1-204ENST00000395756 CHRNA5P30532 468 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 UBASH3AP57075 661 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 FMR1Q06787 632 aaKnown RBP eCLIP20.38■□□□□ 0.85
SREBF1-204ENST00000395756 GRM4Q14833 912 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 TPD52L1Q16890 204 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-204ENST00000395756 CREBRFQ8IUR6 639 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 SLF2Q8IX21 1173 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 RASSF8Q8NHQ8 419 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 HSD3B7Q9H2F3 369 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 USP17L5A8MUK1 530 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 PLCG2P16885 1265 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 C16orf86Q6ZW13 317 aa20.38■□□□□ 0.85
SREBF1-204ENST00000395756 USP27XA6NNY8 438 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
SREBF1-204ENST00000395756 NPR1P16066 1061 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 IL17AQ16552 155 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 MAP7D2Q96T17 732 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 COA1Q9GZY4 146 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 SPTLC3Q9NUV7 552 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 PP2D1A8MPX8 630 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 NFIAQ12857 509 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 ZNF579Q8NAF0 562 aaKnown RBP20.37■□□□□ 0.85
SREBF1-204ENST00000395756 GPCPD1Q9NPB8 672 aa20.37■□□□□ 0.85
SREBF1-204ENST00000395756 AKR1B1P15121 316 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 CDC25BP30305 580 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 NAPAP54920 295 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 BPIFA3Q9BQP9 254 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 PCDHA4Q9UN74 947 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-204ENST00000395756 TMEM232C9JQI7 657 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 ZFPM1Q8IX07 1006 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 PIGSQ96S52 555 aa20.36■□□□□ 0.85
SREBF1-204ENST00000395756 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 NEDD1Q8NHV4 660 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 AKT1S1Q96B36 256 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 PAGE5Q96GU1 130 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 NFE2L3Q9Y4A8 694 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 ECM29Q5VYK3 1845 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 ALDH1B1P30837 517 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 MAPK8IP1Q9UQF2 711 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 CALML3P27482 149 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 PDE6BP35913 854 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 GNAQP50148 359 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 ATP2C1P98194 919 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-204ENST00000395756 DMTNQ08495 405 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 ZSCAN29Q8IWY8 852 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-204ENST00000395756 SAMSN1Q9NSI8 373 aaKnown RBP20.35■□□□□ 0.85
SREBF1-204ENST00000395756 PCDHA6Q9UN73 950 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 PCDHA8Q9Y5H6 950 aa20.35■□□□□ 0.85
SREBF1-204ENST00000395756 PALM3A6NDB9 673 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-204ENST00000395756 FERMT2Q96AC1 680 aa20.34■□□□□ 0.85
SREBF1-204ENST00000395756 KARSQ15046 597 aaKnown RBP20.34■□□□□ 0.85
SREBF1-204ENST00000395756 LETM2Q2VYF4 491 aa20.34■□□□□ 0.85
SREBF1-204ENST00000395756 JAKMIP3Q5VZ66 844 aa20.34■□□□□ 0.85
SREBF1-204ENST00000395756 TMEM60Q9H2L4 133 aa20.34■□□□□ 0.85
SREBF1-204ENST00000395756 SHROOM1Q2M3G4 852 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-204ENST00000395756 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
SREBF1-204ENST00000395756 UIMC1Q96RL1 719 aa20.33■□□□□ 0.85
SREBF1-204ENST00000395756 BIN2Q9UBW5 565 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-204ENST00000395756 SMCO2A6NFE2 343 aa20.33■□□□□ 0.84
SREBF1-204ENST00000395756 IKBKBO14920 756 aa20.33■□□□□ 0.84
SREBF1-204ENST00000395756 SLFN14P0C7P3 912 aa20.33■□□□□ 0.84
SREBF1-204ENST00000395756 CDC42EP5Q6NZY7 148 aa20.33■□□□□ 0.84
SREBF1-204ENST00000395756 TMED8Q6PL24 325 aaPredicted RBP20.33■□□□□ 0.84
SREBF1-204ENST00000395756 COA7Q96BR5 231 aa20.33■□□□□ 0.84
SREBF1-204ENST00000395756 FAM163AQ96GL9 167 aaPredicted RBP20.33■□□□□ 0.84
SREBF1-204ENST00000395756 GAKO14976 1311 aa20.33■□□□□ 0.84
SREBF1-204ENST00000395756 STXBP3O00186 592 aa20.32■□□□□ 0.84
SREBF1-204ENST00000395756 TNNT1P13805 278 aa20.32■□□□□ 0.84
SREBF1-204ENST00000395756 ARMCX5Q6P1M9 558 aa20.32■□□□□ 0.84
SREBF1-204ENST00000395756 ANKS1AQ92625 1134 aa20.32■□□□□ 0.84
SREBF1-204ENST00000395756 TCP11L1Q9NUJ3 509 aa20.32■□□□□ 0.84
SREBF1-204ENST00000395756 BARHL2Q9NY43 387 aa20.32■□□□□ 0.84
SREBF1-204ENST00000395756 SEC63Q9UGP8 760 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms